Enterovibrio litoreus: AB8599_12170
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Entry
AB8599_12170 CDS
T11507
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
elit Enterovibrio litoreus
Pathway
elit03030
DNA replication
elit03430
Mismatch repair
elit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
elit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB8599_12170 (dnaE)
03430 Mismatch repair
AB8599_12170 (dnaE)
03440 Homologous recombination
AB8599_12170 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
elit03032
]
AB8599_12170 (dnaE)
03400 DNA repair and recombination proteins [BR:
elit03400
]
AB8599_12170 (dnaE)
Enzymes [BR:
elit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB8599_12170 (dnaE)
DNA replication proteins [BR:
elit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AB8599_12170 (dnaE)
DNA repair and recombination proteins [BR:
elit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AB8599_12170 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
XKY35773
LinkDB
All DBs
Position
I:complement(2752071..2755550)
Genome browser
AA seq
1159 aa
AA seq
DB search
MSDPRFIHLRVHSDYSMVDGLGKVPPLVKKVGELGMPAMALTDFTNLCGLVKFYNTAQSN
GVKPIIGADFKVQSDAFGDDLCQLTVLAADNAGYKNLTLLISKAYLRGHVQHQPVIDLEW
LVELNEGLIILSGGRRGDLGKALLKGNMALAKQCAAFYQTHFPDAYYIELIRTGRPDEEA
YLHFALDFASEHDLPVVATNEVCFQSSDLFDAHEIRVAIHDGFTLEDPRRPKNYSPQQYL
RTEEEMCELFQDIPEALVNTVEIAKRCNVTVRLNEYFLPNFPTEGLEIGEFLVKKSQEGL
EDRLEFLFPDPQERANRRPEYDERLDIELKVINQMGFPGYFLIVMEFIQWSKDNDIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDIDFCMDKRDKVIDHVAE
IYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKMVPPDPGMTLAKAFDVEPQ
LGEIYEADEEVRELIDTCRILEGCTRNAGKHAGGVVISPTTITDFAPLYCDSEGNFPVTQ
FDKNDVETAGLVKFDFLGLRTLTIIDWALKMINPRLQAEGQDPIRIEAIPMDDFASFKLL
QNSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKRGREV
VSYPDEKWQHESLKEILEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRATFEEGAVKNGIDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPA
EFMAAVMTADMDNTDKIVGLVEECRRMKLTMLPPDVNAGLYRFNVNDKGEIVYGIGAIKG
AGETPIENIIEAREKGGYFRDLFDFCARVDTKKVNKRVIEKLIQAGALDRLGPHRAAMMA
SLDGAIKAASQHRQAEAFGQADMFGVLTDAPEEVEHKYANVPHWPEKVWLEGERETLGLY
LTGHPINSYVKELKHYITWRLEDAHATKRDVVSTIAGLVIAARVMTTKRGTRIGILTLDD
RSGRMEVMLFSDVLEKYLDFIEKDRILVISGQVSFDDFNGGLKMSAREVLDLSQAREKYL
RSLAISVTDRQIDNKFFERFSEILEPYRAGTVPVNLYYQRDDARAKLVLGTEWRITPDDK
LIDDLKTLLGDKQVELEFD
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacccacgttttatccaccttcgtgttcacagtgattactccatggtcgacggc
ctgggtaaagtgcctcctttggttaaaaaagttggcgagcttggtatgccagcgatggca
ttgaccgatttcacgaacctatgcggactggtgaagttctacaacaccgcccaaagcaac
ggtgtgaaacctattattggtgctgactttaaagtgcagtctgacgcgtttggtgacgac
ctttgtcaactgacggtactggctgccgacaacgcgggctacaagaacctcacgttattg
atatcaaaagcctatcttcgtggtcatgttcagcatcaaccggtgatcgatcttgaatgg
ttggtggagctcaatgaaggattgatcatattgtcaggtggtcgacgaggtgatcttggt
aaagcactgctgaaaggcaatatggcactcgccaaacaatgtgcggcgttttaccagact
cactttcctgatgcatattatatagaattgatccgcacaggccgtcctgacgaagaagcg
tacctgcattttgcactagattttgcctccgagcatgatctgcccgtggtggcgaccaac
gaagtgtgttttcagtcatcagatctgtttgatgcccatgaaattcgtgtcgcgatccat
gatggctttacccttgaagatccgcgtcggccaaagaattacagcccacaacaatacctt
cgtactgaagaggaaatgtgtgagttattccaagatattccagaagcactcgtcaacacc
gtagaaatcgccaagcgttgcaacgtgacagtgcgtttgaatgaatacttcttaccaaac
ttccccaccgaagggttggagattggtgaattcttggtgaagaagtctcaggaaggcttg
gaagatcgtcttgagttcttgtttcccgatccgcaagagcgcgcgaaccgccgtccagaa
tatgacgagcgattagatatcgagctcaaggtgatcaaccaaatgggtttccctggctac
ttcctcatcgtgatggagtttatccagtggtcgaaagacaatgatatccccgttggtcct
gggcgagggtcgggtgcaggttcattggtggcctatgcactgaaaattaccgatctcgat
ccgctggaattcgatcttctgttcgaacgctttcttaaccctgaacgtgtctccatgccc
gatttcgatatcgacttttgtatggataaacgcgacaaggtgattgatcacgtcgcggaa
atatatggtcgtgatgcggtatcacagatcattacgtttggtacgatggcggccaaagcg
gttatccgagatgttggtcgtgtgcttggtcatccttacggatttgttgatcgtatctca
aagatggtgccgccagatccaggtatgacattggcgaaagcgtttgatgtcgaacctcaa
ctgggcgagatttatgaagcggatgaagaagttcgtgagctgattgatacgtgtcgaatt
ctcgaagggtgtacgcgaaacgcgggtaaacacgctggtggtgtggttatctctccgact
accatcacagacttcgctccgctatattgtgacagtgaaggcaacttcccggttacgcag
tttgataagaatgacgtagaaaccgcaggactcgttaagttcgacttcttggggttgcgc
acgctaaccatcattgattgggcgttgaagatgattaaccctcgtcttcaagctgagggg
caagaccctattcgcattgaagcaatcccaatggatgattttgcgtcatttaagctacta
caaaattcagaaaccaccgcggtattccagttagaatcccgaggcatgaaagatctgatc
aagcgtctgcaaccggattgctttgaagacatgatcgcattggtggcattgttccgccca
ggcccgcttcaatcaggcatggtagataactttattgaccgtaagcgcggccgtgaggtg
gtttcttaccctgacgaaaaatggcagcacgagtcattaaaagaaattcttgagccaacc
tacggcatcattctttaccaagaacaggtcatgcaaattgcgcaggtgctatcgggttat
acccttggtggcgctgacatgcttcgtcgcgccatgggtaagaaaaagcctgaagagatg
gccaagcagcgtgcaacgtttgaagaaggtgcggtgaagaacggcatcgacggtgagttg
gcgataaagatcttcgacctagtggaaaaattcgcaggttacggttttaacaaatcgcac
tctgccgcctatgcactcgtgtcctaccaaacgctttggttgaaaacgcattatcccgct
gaattcatggcggcagtaatgaccgcggatatggataacacagataaaatcgtcggtttg
gtggaagagtgtcgtcgcatgaagttgacgatgctgccgcccgatgtgaatgctggccta
tatcgttttaatgtgaatgataaaggcgaaatcgtatacggtattggtgcgattaaaggc
gcgggtgagacgccgattgaaaacattattgaagcgcgtgaaaaaggtggctatttccgc
gacctttttgatttttgtgcgcgagttgatacgaaaaaagtcaataaacgtgttattgaa
aaattgattcaggcgggtgcacttgaccgattaggtcctcaccgtgcagccatgatggcg
tcgttagacggggctatcaaagcggcaagccaacatcgtcaagccgaggcatttggtcag
gcagatatgtttggtgtgttgaccgatgcgccagaagaagttgaacacaaatatgcgaat
gttccgcattggcctgagaaagtgtggctggaaggcgaacgtgaaacattaggtttatat
ctaaccggtcatcctatcaacagctacgttaaagagcttaagcattacataacttggcga
ctagaagatgcgcacgcgacaaaacgcgatgtggtatcaacgatagcgggtctcgtgatt
gcagctcgagtcatgacaacgaagcgtggaacgcgtattggcattttgacgctcgacgat
agatctgggcgtatggaagtgatgctattctcagatgtattagaaaagtacttggatttt
atcgaaaaagaccgaattttggtcatatcgggacaggtcagctttgatgacttcaacggt
ggccttaaaatgtcggcacgagaagtgcttgatctctctcaagcgcgtgaaaagtaccta
cgcagtcttgctatatccgtgactgataggcaaattgataacaaattttttgaacgattt
agcgaaatcctagaaccttatcgtgcaggcactgtacctgtgaatctttattaccagcgt
gacgatgcgcgtgcgaaattggtcttaggaacagaatggcggatcacgccagatgataag
ctgatcgatgatttaaaaacgctgctcggcgacaaacaggtcgagttggaatttgactga
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