Elizabethkingia sp. M8: JCR23_00465
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Entry
JCR23_00465 CDS
T09429
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
eliz
Elizabethkingia sp. M8
Brite
KEGG Orthology (KO) [BR:
eliz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eliz03400
]
JCR23_00465
Enzymes [BR:
eliz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JCR23_00465
DNA repair and recombination proteins [BR:
eliz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
JCR23_00465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QQM26990
UniProt:
A0A7T7KHX0
LinkDB
All DBs
Position
100423..103158
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AA seq
911 aa
AA seq
DB search
MSETTQHSFLNKIVDSLLQQDKPLHAYTFILPGKRPAVFIKKILAEKQYEGILPKFQTID
ELITEISGLQQISGIPLWLFAYKVYRKIDAKEDIQSFLKWFPTLLKDWDDMLKFSKSDTP
VLEFMLSDERIKNWGELLGEDKPHRRNLNFWQKMNSFLPLLKKELLQENLATPGIIHEKV
KETVSHFAETTKLQLVFCGFNAFTPVEEKLVRNLLQWDKALCFFQADEYYIKDRRQEAGK
FLREHQHWKEFNEYRPFNWIENHFSENKNIQVFEVSGNIAQTKLLPHILDDLRKRNPELS
NTAVVLLDENLLPPTLESLQHLVKSLNITMGFPLKNLSFSVAMKKLFYLQKQLDKNSSSY
YYADLVPLLEELPYKKEDEPIIKGFLEQLEERNLVYISKKLFHELLGGISYINLLTKPDD
PKVYLDTLIDFCVSCKFEKINDIDYENISSFEKAFISLKNQLQQYDFLVDIITLEVLVNQ
LVSTETIDFEGEPLSGLQLMGLLETRLLNFENVIMLSINEGKLPLGRTQNTYLPFDVRRN
FGMNTFLENDSIYAYHFYRLIQEAKNVYMLFNGLTSGVNIGEKSRFITQIEMESLHRIQN
YVVDSSSEPVNQEPIRIRKTPLVLEKLELWKQKVSPSHLNAYLYNPLDFYLNQILNTRLP
DELEEEISVRNFGNLVHYTLDYLYQSLLNRKLTITDLKQAQNKVEEALDYIIVEKLKHSP
DYYKRGMNYIHKSVAKRTLQNIIQKDLDDVEQGNSLEILALEHNIHADFYLDDQQQDKIS
FNGFADRIDRFNGTLRIIDYKSAKAGDLNIKSNPKKDEDTQLFDKKYKQEVQLSIYAHCA
LTSGAFSDQEVQCGIWSFVAPDEGPKMLNISGDSYISKSDLELPMKSVKSIILDILNPEK
DFVEEDSAGWG
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaactacccaacatagttttctaaacaaaattgttgacagtctccttcaacag
gacaagcctcttcatgcctatacctttatacttccgggtaaacgtccggcagtctttatc
aaaaagattctggcagagaaacaatatgaaggaatactaccgaaatttcagactattgac
gagcttattacagaaatatccggattacagcagatctcaggtattcctttgtggcttttc
gcttacaaagtctatcgtaaaatagatgcaaaagaggatatacagtcctttttgaagtgg
ttcccaacacttttaaaggattgggatgatatgcttaaattttctaaaagtgatactccg
gttttggaatttatgctttcagacgaacgtatcaagaactggggcgagttgcttggtgaa
gataagccacaccgacgcaacctgaacttctggcagaaaatgaattcctttcttccgctg
ctgaaaaaagaattgcttcaggaaaatctggcaactcccggaattatccatgaaaaggta
aaagaaactgtaagccactttgctgaaaccacaaaactacaattggtattctgtggtttt
aatgcctttacacctgtagaagaaaagctcgtcagaaatctccttcaatgggacaaggca
ttatgttttttccaggcagacgaatattatatcaaagacagacgccaggaagccggaaaa
tttctgcgcgaacatcagcattggaaagaatttaacgaatacagacctttcaactggata
gaaaatcatttttcggaaaataaaaacattcaggtattcgaagtttccggaaatattgca
cagacaaaacttcttccgcatattctggatgacctccggaagcgaaatcctgaactaagt
aatactgcagtagttcttctggatgaaaatctgctgccaccgacgctggaaagcctccag
catctggtgaaaagtctgaatattacaatggggttcccgctgaaaaatttatccttcagt
gtggccatgaaaaagcttttttatctgcaaaaacagttggataaaaacagctcatcttat
tattatgcagaccttgttccactgttagaggaattaccatacaagaaagaagatgaacct
attattaaaggttttctggagcagctggaagaaagaaacctggtttatatttccaaaaaa
ctatttcatgagcttttaggaggtatatcttatattaatttactgaccaagccagatgac
ccaaaagtatatctggatacacttatcgacttctgcgtatcatgtaagtttgaaaaaata
aacgatatagattatgaaaatatatcgagcttcgagaaagcatttataagtcttaaaaac
cagttacaacaatatgacttccttgtagacatcattacgctggaagtgttggtaaaccaa
ctcgtaagcaccgaaaccatagattttgaaggcgagcctctttcgggattacaacttatg
gggcttttggaaacccgtttgctgaattttgaaaatgttattatgctttctataaatgaa
ggtaaactaccattgggaagaacccagaatacttacctgcctttcgatgtccgtcggaat
ttcggaatgaacacctttctggaaaacgattctatttatgcatatcatttttaccgactt
attcaggaagctaaaaatgtatatatgctctttaacggactcacaagtggggtaaatatc
ggtgagaaaagccgtttcatcacccagatcgaaatggaaagtctgcaccggatacaaaat
tatgttgtagacagctcatccgaacctgtgaatcaggaaccaatacgcatcaggaaaaca
ccattggtattggaaaagctggaactctggaaacagaaagtttcaccttcacatctcaat
gcttatctctacaatccattggatttctacctgaatcagattctgaacacaagacttccg
gatgaattggaagaggaaatttcggttcgtaactttggtaatcttgtgcactatacactg
gattatctctaccaaagcttattgaacagaaaactgacaataacagatcttaaacaggct
cagaataaagtagaggaggcactggactatattatcgtagaaaaactaaaacattccccg
gattattataaacgcggaatgaattacattcataaatcggttgctaaaagaacacttcag
aatatcatccagaaagatctggacgatgtagagcaaggaaactcattggaaatcctggct
ctggagcataatattcatgctgatttttatctggatgatcagcagcaggataaaataagc
ttcaatggtttcgccgataggatagaccgcttcaacggaacactccgcattatcgactac
aaaagtgccaaagcgggcgaccttaatataaaatctaatcctaaaaaggatgaggacaca
cagttatttgataaaaaatacaaacaggaagtacagctatctatctatgcacattgtgcc
ttgacatccggagctttctcggatcaggaagtacaatgtggtatatggagctttgtagcg
cctgatgaggggcctaaaatgctgaatatatccggagatagctatatcagtaaatcggac
cttgaactgccaatgaaatcggtaaaatctattatactggatatcctgaatccggagaag
gactttgttgaagaggacagcgcaggatggggctaa
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