Elizabethkingia sp. M8: JCR23_06295
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Entry
JCR23_06295 CDS
T09429
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
eliz
Elizabethkingia sp. M8
Pathway
eliz02024
Quorum sensing
eliz03060
Protein export
eliz03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
eliz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
JCR23_06295 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JCR23_06295 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JCR23_06295 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
eliz02044
]
JCR23_06295 (ffh)
Enzymes [BR:
eliz01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
JCR23_06295 (ffh)
Secretion system [BR:
eliz02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
JCR23_06295 (ffh)
Eukaryotic Sec-SRP protein
JCR23_06295 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
cobW
SRPRB
Zeta_toxin
ATPase
AAA_30
nSTAND3
CLP1_P
AAA_15
ATP_bind_1
APS_kinase
AAA_24
PDE8A_N
ResIII
AAA_18
CbiA
AAA_19
DUF2780
AAA_14
AAA_17
SLFN-g3_helicase
AAA_33
DO-GTPase1
ATPase_2
AAA_16
KTI12
NACHT
NPHP3_N
MMR_HSR1
TsaE
6PF2K
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
QQM28030
LinkDB
All DBs
Position
complement(1388394..1389758)
Genome browser
AA seq
454 aa
AA seq
DB search
MFNSLQDKLDKALQNIQGRGKITEINVAETVKEIRRALVDADVNFKVAKDLTKRVQDKAL
GQNVLTSITPGQLMTKIVHDELVDLMGGTNEGLNLSEKPTIILIAGLQGSGKTTFSGKLA
NFLKKKKSKNPLLVACDVYRPAAIDQLKVLGGQTGVPVYTEEGNLNPVQISQNAIEFAKQ
NKHDVIIIDTAGRLAIDQEMMNEIRNVHQSVKPTETLFVVDSMTGQDAVNTAKAFNDVLN
YNGVVLTKLDGDTRGGAALTIRSVVEKPIKFISTGEKMEALDIFYPERMADRILGMGDVV
SLVERAQEQFDEEEAKKLHKKIAKNEFGFDDFLKQIQQIKKMGNMKDLLGMLPGVGKAIK
DVDINDDAFKHIEAIIQSMTPEERRRPSTINMSRKQRIAKGAGRKLEDVNALMKQFEQMG
KMMKMMQGPQGKQLMAMMGKGMPGMGGGMPGFGK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatagtttacaggacaaactagataaagctttacaaaatatccagggacgcggt
aagattaccgagattaacgttgccgaaacggttaaagagattcgtcgtgcattagtagat
gccgatgttaactttaaggtagcaaaagatcttacaaaaagagttcaggataaagcttta
ggacaaaatgttttaacatccattaccccgggacaattgatgacaaaaattgttcatgat
gaattagtggatttaatgggaggaaccaatgaaggtcttaatctttctgaaaaaccaaca
attatactaattgcaggtttacaggggtctggtaaaacgacattctccgggaaattagca
aacttcctgaagaagaaaaagagcaaaaaccctttattggtagcatgtgacgtttaccgt
cctgctgcgattgatcagctaaaagtattaggtggccagacaggagttcctgtatatact
gaggaaggtaacctaaatccggttcagatttctcagaatgcaatagaatttgcaaagcaa
aacaagcatgatgttatcattatagataccgcagggcgtttggcaattgatcaggagatg
atgaacgaaattcgtaacgttcaccagtctgtaaaacctacagaaactcttttcgtagtt
gactctatgacaggacaggatgctgtgaatacagcaaaagccttcaatgatgtactgaat
tataatggtgtagttcttactaagctagatggtgatacccgtggtggtgcagcattaaca
atccgttcggtagtagaaaaaccaattaagtttatttctactggtgagaaaatggaggcg
ttggatattttctatccggaaaggatggcagacagaatcctgggaatgggggacgttgtt
tctttagtagaaagagcccaggaacagtttgatgaagaagaagcaaaaaagctacacaag
aaaattgctaagaacgaatttggtttcgacgacttcttaaaacaaatccagcagattaag
aaaatgggtaacatgaaagaccttttaggaatgttaccgggagtaggaaaagctataaaa
gatgtggatatcaacgatgatgcttttaagcacatcgaagcaattatccagtctatgact
ccggaagaaagaagaagaccaagtactattaatatgtccagaaagcagcgtattgctaaa
ggagcaggaagaaaacttgaggatgtgaacgctctaatgaagcagtttgagcaaatgggg
aaaatgatgaagatgatgcaagggcctcagggaaaacagttaatggccatgatgggcaaa
ggtatgccgggaatgggtggtggaatgccaggctttggtaagtaa
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