Elizabethkingia sp. M8: JCR23_07980
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Entry
JCR23_07980 CDS
T09429
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
eliz
Elizabethkingia sp. M8
Brite
KEGG Orthology (KO) [BR:
eliz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eliz02000
]
JCR23_07980
Transporters [BR:
eliz02000
]
Other transporters
Pores ion channels [TC:
1
]
JCR23_07980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl_2
TSP_3
DUF748
Motif
Other DBs
NCBI-ProteinID:
QQM28335
LinkDB
All DBs
Position
complement(1744363..1745817)
Genome browser
AA seq
484 aa
AA seq
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MKLNFASVALAFVLPVAVYGQDSTAVATTSAAQGQYPNAYTSGSANVSPFTNKSKRFNDW
SISAGAGTVIMKSGSLYSLHDESGPKNLFGWTAYFSVDKAITHAFGLKLQYDKGETRQGW
VSTKDHVASSGAAGRTQYDAITILGDLNLSNLFRRVDNHSPYRWALHAYGGIGTIAYRSY
LQEPGPVYNQSLTKEVKPFKLNSFYAQLGTGLKYRVSKSFDLEGRVMYSITGGKGFDGAR
GNYVDPARAGNNDMINATLGLTYNIGKHESHLFWHDPLQEIYYKLDVLENKSQDIEVCKK
GDADNDGVCDDWDRELNTPAGARVDGSGRALDTDLDGVIDLYDKCVTVPGPPENNGCPTN
NQVVTEVSRSLEGIEFDLNSDRILSSNTAILNSAVNYINSSEMGSKYTVVGAADARGTVQ
YNQKLSQKRANNVKNYLIQNGVQSSRLDAVGHGKSDLKYPECNPASKCPEWKNRANRRVY
FQQK
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaaatttcgcaagtgtagctttagcatttgtattgcctgttgccgtttatggt
caggactctactgctgtagctacaacatctgcagctcagggacaataccctaatgcgtat
acatctggttcagctaatgtatctccttttactaacaaatctaaaagatttaatgactgg
tctatttctgccggagcaggtacagttatcatgaaaagtggtagtttgtattcacttcat
gatgagtctggacctaagaatttattcggatggacagcctattttagtgtagacaaagct
attactcatgccttcggcttgaaacttcaatatgacaaaggagagacaagacaaggttgg
gtaagtactaaagatcatgtcgcaagtagcggtgccgctggaagaacccaatatgatgca
attacaatcttgggagaccttaatctatctaatcttttcagaagagtagataatcattct
ccttacagatgggcacttcatgcttacggaggtataggtaccattgcttacagatcatac
ttacaagagcctggaccggtttacaaccaatctttaacaaaagaagtaaagccttttaaa
ttaaactctttctatgcacaactaggtaccggattgaagtacagagtaagcaaatctttt
gatttagaaggaagggtaatgtactctattaccggaggtaaaggctttgacggtgcaaga
ggaaactatgtagatcctgcaagagctggtaacaatgacatgatcaatgctactttaggt
cttacttataacattggaaagcatgaatcgcatttattctggcatgatccgttacaggaa
atctattacaaacttgatgtcttagaaaataagagtcaggatatcgaagtatgtaagaaa
ggagacgctgataacgatggtgtatgcgatgactgggatagagagttaaatactccagcc
ggagcaagagtagatggttctggtagagcattagatacagacttagacggagtaatcgat
ctttatgataagtgtgttactgttcctggaccaccagaaaacaacggatgtccaacaaac
aatcaggttgttactgaagtttcaagaagccttgagggaatcgaatttgatttaaattca
gatagaattctttcttccaacactgctatcttaaacagtgctgttaactatattaactca
tctgaaatgggttctaaatatacagttgtaggtgctgctgatgctagagggacagttcag
tataaccagaaattatctcagaaaagagctaataatgtgaagaactatttaatccagaac
ggtgttcagtcttcaagattagatgcggtaggacatggtaagagtgatcttaaatatcct
gaatgtaatcctgcaagcaaatgcccagaatggaaaaacagagctaacagaagagtttat
ttccaacagaaataa
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