Elizabethkingia sp. M8: JCR23_09645
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Entry
JCR23_09645 CDS
T09429
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
eliz
Elizabethkingia sp. M8
Pathway
eliz03030
DNA replication
eliz03430
Mismatch repair
eliz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eliz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JCR23_09645
03430 Mismatch repair
JCR23_09645
03440 Homologous recombination
JCR23_09645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eliz03032
]
JCR23_09645
03400 DNA repair and recombination proteins [BR:
eliz03400
]
JCR23_09645
Enzymes [BR:
eliz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JCR23_09645
DNA replication proteins [BR:
eliz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JCR23_09645
DNA repair and recombination proteins [BR:
eliz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JCR23_09645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
RNase_H_2
DNA_pol_A_exo1
DNApol_Exo
Motif
Other DBs
NCBI-ProteinID:
QQM25176
LinkDB
All DBs
Position
complement(2087810..2089033)
Genome browser
AA seq
407 aa
AA seq
DB search
MYSIIDIESNGGAFKKESIIEIAIYRFDGHEIVDQFISLVNPEDVISPYVQKLTGITAKM
VKTAPKFHEIAKRIVEITEGTVIVGHNVEFDYRMIRQSFHRLGYNYERETIDTIPLAKKL
IPNEESYSLGKLSKSLGIPLTDRHRASGDARATLELFKILLAKDQEKEILKHQKETQVSN
NLNKKIMALTEFLPAENGIIYFQNANGEILYTDYSSNIYQTATKIFHARTKKWDKLKAET
TQIHYEFTGNELIAKLMMLQKTKKKTPSLPFGLYYKNEKYIIERTKGQTGDLLKFKSFSQ
GNKVKTFINEQERFQDNPTALKEFLSLDNRNEIWISEGRTKSEKSFLVLEKGKLTGYGFY
ELHHQIKSLNKINKLKIEIHAVNNMIYNELKLSLLRNNYEIKNLPTT
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
ttgtattcaattatagatattgaaagtaatggaggtgctttcaagaaagaaagtattatc
gaaattgctatataccgattcgatggacacgaaatcgtagatcagtttatatctctggta
aatccggaagatgtaatttctccgtatgtccaaaagttgacaggaatcactgctaaaatg
gtgaaaacagcacccaagtttcatgaaattgcgaaaaggattgttgaaatcacagaaggt
actgtaattgtggggcacaatgtagagttcgattatcgaatgatcaggcaatcgtttcac
cgcttagggtataactacgaaagagaaacgatagatactattccgttagcaaaaaagcta
attccaaatgaagaaagctactctctgggtaagctttctaagtctctggggatcccactc
acagacagacatcgtgcctccggcgatgcaagagctactctggagttgttcaaaatatta
ttagcgaaagatcaggaaaaagaaattctaaaacaccagaaggaaactcaggtatctaac
aatctgaataaaaagattatggcacttacagaatttcttccggcagaaaacggaattatc
tattttcagaatgcaaatggtgaaattctgtataccgattattcatctaatatttatcag
actgcaacaaagattttccatgcaaggacaaagaaatgggacaagctaaaggctgagact
acccagattcattatgaatttacaggaaatgagcttattgcaaagcttatgatgttgcag
aaaacgaaaaagaaaacgccttcattgcctttcggattgtattataagaatgagaaatac
attatagaaagaactaaagggcagacaggtgatttactgaagtttaaatccttttcgcaa
gggaataaagtgaaaacttttattaatgaacaggagcgttttcaggataacccaacagct
ttaaaagagtttctttcattagataatcgtaatgaaatatggatttcagagggaaggact
aaaagtgaaaaatcatttttagtactggaaaaaggaaaactgacggggtacggattttat
gaacttcatcaccagataaagtctttaaataagattaataaactgaaaattgaaattcat
gcagtaaataatatgatatacaacgaattaaaattatctttgctgcgcaataattatgag
ataaaaaatctgccaacaacataa
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