Elizabethkingia sp. M8: JCR23_12080
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Entry
JCR23_12080 CDS
T09429
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
eliz
Elizabethkingia sp. M8
Pathway
eliz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eliz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JCR23_12080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eliz03400
]
JCR23_12080
DNA repair and recombination proteins [BR:
eliz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
JCR23_12080
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MSSS
Motif
Other DBs
NCBI-ProteinID:
QQM25627
UniProt:
A0A7T7HAK4
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Position
2625794..2627683
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AA seq
629 aa
AA seq
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MIYPDNFEEKIGINTIREFIIEKCHSVLGVEKVESMAFSSDYTTVSEWLEQTHEFLQIIQ
NKEDFPVYNYLDLRQALINIDKDPTVWFSEEDVSGLGNSLMAVDRITAFLNNSRASDNSI
KYPMLHTMSGKIKTFPQFVEKTYSILDKSGRIKDNASHLLADIRKNKTEAAKDITRNMQA
AIRNAQSQGIVSKEVFPDMRNGYLVIPVIASYKRRIKGEVRGDSGSGRTVYIEPEAVVEA
TNRLKELEADERREVIRILTEFTNMLRPEVADLLISYDFLGTIDFIRAKALFSARINAVK
PVFENKQQMNWIQAVHPLLNITLRQQNKKAIPLDIVLNQENRILVVSGVNAGGKSLCLKT
AALLQYMLQSGLLIPVRSGSHAGIFDHIFIDIGDGQSIENSLSTYTSHLKNMKFFVEHND
DKTLLLIDEFGSGTEPQIGGAIAETLLERFNRKHSFGLITTHFQNLKQFAYETKGIVNGA
MLYDVEEMKPLYKLAIGNPGSSFAIEVARKTGLPEDVIMDSAERIGTEFANMDNLLQSIV
RDKLYWGKKRKEVEVSEGQSCSDCVGKTLNENREIETAAEVSVVGIGDRVKLEGQAAIGT
VLDIKGKQATVVFGAIKSIVKYERLIRFE
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgatttacccggataattttgaagaaaaaataggaattaatacaatccgagaatttatt
atagaaaaatgccacagtgtacttggagtggagaaagtagaatcaatggctttttcatcc
gattatactacagtttcagaatggctggaacagacgcatgaatttttacagattatacag
aataaagaagattttccggtatataattatctggatcttcggcaagctcttattaatata
gacaaagacccaacagtatggttctcggaggaggatgtttccggacttggaaattccctt
atggctgttgatcgtattacagcatttttaaataattccagagcgtcggataatagtatt
aaatatccgatgcttcatactatgagcggaaaaataaaaacatttccacaatttgtagaa
aaaacatattctatattggacaaatccggacgtataaaagataatgcttcacatctgctg
gcagacatccgtaagaataaaacagaggctgctaaagatattacgagaaatatgcaggca
gctattcgcaatgcacagtcacaaggtattgtttcaaaagaagtattcccagatatgcgt
aatggttatttggttattcctgtaattgcatcttataaaagaagaataaaaggtgaggta
cggggagattctggaagtggtagaactgtttatatagaaccggaagcagtagtagaggct
acaaacaggcttaaagagctggaagccgatgaacgccgggaggttataaggatactaaca
gagtttaccaatatgctaaggccagaagttgcagacttgttgatatcatatgattttctg
ggaactatagattttatcagagcaaaagccttattttctgcacgtattaatgctgtaaaa
cctgtttttgaaaataaacagcagatgaattggatacaggctgtgcacccattactcaat
atcacgctgagacagcagaataaaaaagctattccattagatattgtactgaaccaggaa
aacagaatacttgtagtgtccggtgttaatgcgggagggaagtccttgtgtctaaaaaca
gcagcattgcttcagtatatgcttcagtctggattgttaattccggttagatccggttcg
catgcaggaattttcgaccatatttttatagatataggggatggacaaagtatagaaaac
agccttagtacttatacttcgcatctgaaaaatatgaaattctttgtagaacataatgat
gataaaacacttttactgatagatgagtttgggagcggaacagagccgcaaataggcgga
gctattgcagaaacattgttggaaagatttaaccgtaagcacagtttcggacttattaca
acacattttcagaatcttaaacagtttgcctatgagactaaaggtattgtgaatggagct
atgctgtatgatgttgaagaaatgaagcctttgtacaagttggctattggaaatccggga
agctcttttgcgattgaagtggcacgaaaaacagggcttcctgaagatgttattatggat
tcagcagaaagaataggaactgagtttgctaatatggacaatctgcttcaatcaatagta
agggataaactttattgggggaaaaaaagaaaagaagtagaagtgtcagaagggcagtcg
tgtagtgattgtgtaggaaaaactttaaatgaaaatagagagatcgaaactgctgcagaa
gtttcagttgttggaattggagatagagtaaagttggagggtcaggcagctataggaact
gttttggatataaagggtaaacaggctacagttgtatttggggctataaaaagtatagtt
aagtacgaacgtttgatccgctttgaataa
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