Elizabethkingia sp. M8: JCR23_15085
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Entry
JCR23_15085 CDS
T09429
Name
(GenBank) Lrp/AsnC ligand binding domain-containing protein
KO
K03718
Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Organism
eliz
Elizabethkingia sp. M8
Brite
KEGG Orthology (KO) [BR:
eliz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eliz03000
]
JCR23_15085
Transcription factors [BR:
eliz03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
JCR23_15085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
HTH_11
HTH_34
HVO_A0114
ACT_4
MarR_2
HTH_5
HxlR
MarR
DUF4423
NapD
TrmB
HTH_Crp_2
AsnC_trans_reg2
HTH_20
LexA_DNA_bind
DDRGK
Sigma70_r4
HTH_CodY
HTH_IclR
AsnC_trans_reg_3
Rrf2
PMT2_N
NirdL-like_HTH
Saccharop_dh_N
CHDCT2
Fe_dep_repress
HTH_10
HTH_DeoR
HTH_36
HTH_28
HTH_1
Motif
Other DBs
NCBI-ProteinID:
QQM26172
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Position
3268802..3269272
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AA seq
156 aa
AA seq
DB search
MKNLASAGYHLDAIDKEIIYLLMDNAKTSLAHISSHVGISTTAVHQRIKKLEQAGVIENS
ISFLNPRKVGYKVTSYMGVYLDQPSHYNEIIKSLEQINEVVEAHYTTGNYTVFLKVLAKD
NDHLMEILSKIQKLKGVMRTETFISLEQSISRQLKV
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatttagcaagcgcaggatatcatcttgatgctattgacaaggaaattatctat
ttattgatggataatgccaaaacttctttggcacatatctcatctcatgtaggtatttct
acaacagcagtgcatcagaggataaaaaaattagaacaagcaggtgtaatcgagaattct
atctctttcctgaatccgagaaaagtaggttacaaagtgacttcttatatgggagtttat
ttggatcagcctagtcactacaatgaaattatcaaatctttagaacaaattaatgaggtt
gttgaagctcattatacaacagggaactatacagtttttcttaaagttcttgcaaaagac
aacgatcatttaatggagattttaagcaaaattcagaagcttaaaggtgtgatgagaacc
gagactttcatatctttggagcagagtatttcaagacagcttaaagtataa
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