Elizabethkingia sp. M8: JCR23_15265
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Entry
JCR23_15265 CDS
T09429
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
eliz
Elizabethkingia sp. M8
Brite
KEGG Orthology (KO) [BR:
eliz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eliz03009
]
JCR23_15265 (rimO)
Enzymes [BR:
eliz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
JCR23_15265 (rimO)
Ribosome biogenesis [BR:
eliz03009
]
Prokaryotic type
ribosomal protein modification factors
JCR23_15265 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
TMF_TATA_bd
Motif
Other DBs
NCBI-ProteinID:
QQM26207
LinkDB
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Position
3309384..3310688
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AA seq
434 aa
AA seq
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MRTKSSNKKKINIVTLGCSKNVYDSEVLMGQLKANGKEVVHEDKGDIVVINTCGFIDNAK
EESINTILEYVDLKNQGAVEKVFVTGCLSERYKPDLIREIPDVDQYFGTRDLPILLKHLG
ADYRHELVGERLTTTPRHYAYLKISEGCDRPCTFCAIPLMRGNHISTPIENLVKEAENLA
KNGVKELILIAQDLTFYGLDIYKKRALGDLLKELVKVEGIEWIRLHYAFPTGFPEDVLEI
IKEEPKICNYIDIPLQHINNDVLKRMKRGTTFEKTNALLDKFREKVPGMAIRTTLIVGFP
GETEEHFEELKNWVRDQRFDRLGCFTYSHEENTGAFIYEDDVPAEVKERRVEEIMEVQQQ
ISYEINQEKVGKTFKCLFDRKEGNYFIGRTEFDSPDVDNTVLVPAENTYISVGEFVNVKI
TSADDFDLYGEVVS
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcggacaaaatcttctaacaaaaagaaaattaatattgtaacactcgggtgttccaag
aatgtatatgactccgaagtattgatggggcagcttaaagccaatggcaaagaggtggtt
catgaagacaagggagatattgttgtaattaatacctgtggatttattgataatgctaaa
gaagagagtattaatacaattctggaatatgtagatcttaaaaatcagggtgctgtagaa
aaagttttcgttacaggatgtctttccgaaagatataaaccggatttgataagagaaatt
ccggatgtggatcagtatttcggaacccgagatctgccaattttactaaaacatttagga
gcagattaccgtcatgaactggtaggagagcgtcttactacaacaccaagacattatgct
taccttaaaatttctgaaggctgcgacagaccgtgtactttctgtgcaatacctttaatg
agaggtaatcacatttctactccaatagaaaatttggtgaaagaagctgagaatttggct
aagaatggggtgaaagaattaattcttattgctcaggatcttacattctacggattagat
atttataaaaaacgtgcattaggtgatcttctgaaagagcttgtaaaagtagaaggaatt
gaatggattcgtctgcactatgctttccctacaggtttcccggaagatgtactggaaatt
ataaaagaagaacctaaaatctgtaactatatagatattccgcttcagcatattaataat
gatgttctaaagcgtatgaaacgggggactactttcgagaagaccaatgctttattagat
aagttccgtgagaaagttccgggaatggctatcagaacaactcttatcgtaggtttccct
ggtgaaactgaagagcattttgaagaattgaaaaactgggtaagagatcagcgttttgac
agattaggctgttttacctattctcacgaagaaaatacaggcgcattcatttatgaagac
gatgttcctgcggaagttaaagaacgccgtgtagaagaaattatggaagttcagcagcaa
atttcatatgagataaatcaggaaaaagttggtaagaccttcaaatgtctgttcgataga
aaagaaggaaactactttatcggaagaacagaattcgattctccggatgtagacaacact
gttttggtacctgctgaaaatacgtatatcagtgtaggagagtttgttaatgtgaaaatt
acttctgctgatgatttcgatttatacggagaagtagtaagttaa
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