Elizabethkingia sp. M8: JCR23_18990
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Entry
JCR23_18990 CDS
T09429
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
eliz
Elizabethkingia sp. M8
Pathway
eliz02024
Quorum sensing
eliz03060
Protein export
eliz03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
eliz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
JCR23_18990 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JCR23_18990 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JCR23_18990 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
eliz02044
]
JCR23_18990 (secD)
Secretion system [BR:
eliz02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
JCR23_18990 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
DUF3165
Motif
Other DBs
NCBI-ProteinID:
QQM26873
LinkDB
All DBs
Position
4080437..4083331
Genome browser
AA seq
964 aa
AA seq
DB search
MQGKGLITTIAIILGLICINELLPSFYANRIEKEAQALSGGNEVKYKKELEKLSKDTLNL
GFTKLDYRSAKEKEMKLGLDLKGGINVLLEINQRDLVNDLTNYSTNPVLVEALNRTDAAQ
KFSTKTYIDNFFVQFDAVNKEKGTNVKLSNPEVFGTQKLSDQIKFNTPDDEVKKIISKKI
DASVGSAFEVIRTRIDKLGVTQPNVQRVPGTGRILVEMPGIKDIDRVKKLLQTSARLQFW
EVQTAGEVAPYFQQLTSVVMTKGDSIGVNKNMNLINTLDMQNGARQNGVGNVKLSDTATV
NKLLNSAQAIKARPANLRFTKFMWAAKPESNTPDNLTLYAIRGTANNKAPLDGAVKDARV
NYDQIGRIEIGMQMDSDGTKVWKTLTEKNIGRPIAVTLDDNVYTAPNVNTAIPNGQSVIT
GNFSQDEAKDLVDVLNSGKLPATAKIVQADVVGPSLGAESINAGVISFIIAFALIMVYII
FYYGMAGVYAVIAMIINLFYVFGIMDSIDATLTLPGIAGIVLSMAMAVDTNVIIYERTKE
ELFAGKGIREAYNDGFKHALSAIIDGHATTLLTAVVLYIFGTGPIQGFAVTLIIGILMTF
FTSVLLSRVMIFSRLGKGKEISVWTSFSKNLFRNIWIDFIGKRKWSYIFSTILMVICIAS
IVTKGFKFGVDFKGGRSYVVRFDKPVVASDIQEELAPLFKTNDGKNEAVDVKTFGNSNQL
RITTDYKIDDVNTTVDSEIEHKLYDGLKKHLPANETFEAFKSSDVGHAGIVSSTKVGPTV
ADDIQVHGTLAVLAALAGIFIYILLRFRKWQFSLGAVVALFHDAVVILGVFSLFYTVAPF
NMEINQDFIAAVLTVLGYSINDTVIVFDRIREYLRERKSISLAGLFDDSISSTLGRTFNT
SFTTILVILAIFIFGGDNMKGFMFALLIGIGFGTYSSIFIASAIAYDCLKGRKKDAPPVH
EINK
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggaaaaggactcattaccactattgcgatcatcctcggattgatatgcattaat
gaactcctgccgagtttctatgcgaatagaattgagaaagaggcacaagctctttccgga
ggcaatgaagttaagtacaaaaaagaattggaaaagttatccaaagacacgcttaatctg
ggtttcacaaaactggattatcgttctgccaaggaaaaagaaatgaaacttggtctggat
ttgaaaggagggatcaacgttttgttggaaattaatcaaagagacctggttaatgattta
acgaattattccacaaaccctgttttagtagaagctctgaatagaacagatgctgcacaa
aagttctctactaagacatatatcgataacttttttgttcagtttgatgctgtaaacaag
gaaaaaggaacaaatgtaaagctttctaaccctgaagttttcggtactcagaagctaagt
gatcagattaaatttaatacgcctgatgatgaagtaaaaaagattatttctaagaaaatt
gatgcctctgtaggttcggctttcgaagtaatccgtacacgtattgataaactaggagta
acgcagccaaacgtacagagagtaccaggaacaggtcgtattttggttgaaatgcctggt
atcaaggatattgacagagtaaaaaaattactacagacttcggcaagattacagttctgg
gaagtacaaactgcaggtgaagttgctccgtatttccaacaacttacttctgttgtaatg
acaaaaggagattctattggtgttaataagaacatgaatcttatcaatactctggatatg
caaaacggtgcaagacagaatggagtaggtaatgttaaactttcagatactgctactgta
aataaattattaaacagtgctcaggctattaaagcacgtccggctaaccttagatttact
aagtttatgtgggctgcaaaacctgaatccaatactccggataatctgacattatatgca
atccgtggaacagcaaacaacaaagctccacttgatggtgcggtaaaagatgcacgtgtt
aactacgaccagatcggaagaattgaaatcggaatgcaaatggattctgatggtactaaa
gtatggaaaacgcttaccgagaaaaatatcggaagacctatcgccgtaactctggatgat
aatgtatatactgctcctaatgtaaatacggctattcctaacggacaatctgtaattact
ggtaacttcagtcaggatgaagctaaagacttagtagatgtactaaactcgggtaagctt
cctgctacagctaaaattgttcaggcagatgttgttggaccttcattaggtgcggagtca
atcaacgcaggggttatctctttcatcattgcatttgcccttatcatggtatatattatt
ttctactatggtatggctggtgtttatgcagtaattgcaatgatcattaacttattctac
gtgttcggtattatggactctatcgatgctacacttaccttaccaggtatcgcaggtatc
gttttatccatggccatggcagtagatacgaatgtaatcatctacgagagaactaaagaa
gaattatttgcaggaaaaggaatccgtgaagcatacaatgatggtttcaaacatgcttta
tctgcaattattgacggacacgcaacaacattattaacggctgttgtattatatattttc
ggtacaggaccaatccagggatttgctgtaaccttaattattggtatcctgatgacgttc
tttacttctgtactattgtcgagagtaatgatcttcagcagacttggaaaaggtaaagag
atttctgtatggacatctttctcaaaaaatcttttcagaaatatctggatcgactttatc
gggaaaagaaagtggtcttacatcttctctaccatattgatggttatctgtattgcatct
attgttacaaagggcttcaaatttggagttgacttcaaaggaggaagaagctatgttgta
agatttgacaaaccagttgtggcttctgatattcaggaagagttggcaccgctattcaaa
actaatgacggtaaaaatgaagctgtagatgttaaaacatttggtaactctaatcagctt
agaataacaactgactataaaattgatgacgttaacacaactgttgactctgagattgaa
cataaattatatgatggattaaagaaacaccttccggctaacgaaacattcgaagctttc
aaaagttctgatgttggacatgcaggaatcgtttcttccacgaaagtaggacctacagta
gcagatgatattcaggttcacggtacattagcagttcttgctgctttagcaggaatcttc
atctacatcttattaagatttagaaaatggcaattctctcttggtgctgttgtggcattg
ttccacgatgcggtagtaattttaggggtattctccttattctacacagtagcgccattc
aatatggagattaaccaggatttcattgcagctgtattaacagtattaggatattccatt
aacgatacggtaattgtatttgaccgtatccgtgaataccttagagaaagaaaatctatc
agccttgcaggtctgttcgatgattccatcagcagcacgttaggtagaacattcaacact
tcattcactacgatactggttatcctggcgatcttcattttcggaggtgataatatgaag
ggcttcatgtttgcattattaatcggtattggtttcggtacttattcatccatcttcatc
gcatcagcaattgcttatgactgtttgaaaggacgaaaaaaagacgctccgccagtacat
gagataaacaaataa
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