Williamsoniiplasma luminosum: ELUMI_v1c03460
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Entry
ELUMI_v1c03460 CDS
T05209
Symbol
rnj
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
elj
Williamsoniiplasma luminosum
Pathway
elj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
elj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ELUMI_v1c03460 (rnj)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elj03019
]
ELUMI_v1c03460 (rnj)
Messenger RNA biogenesis [BR:
elj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ELUMI_v1c03460 (rnj)
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Ortholog
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GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
ATZ17071
UniProt:
A0A2K8NWF6
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All DBs
Position
complement(429187..431007)
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AA seq
606 aa
AA seq
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MKENDIKINIPVNKEVLEKEVLEASDIKPFVFKQKEIKRHYQNTKIPTKVFALGGLEEIG
KNTYAIEYDQEIILIDAGVKFPDATMLGVSAVIPDYSYLKENESKIKALFITHGHEDHIG
GIHYLVQQVKIPVIFAPSLAAALIRDRLKEYKITDKTVVKEYLSDDVWKSANFRVTFAAL
NHSIPDAFGILVETPNGNIFSTGDYKFDWSPLGHYAELNKLAAMGDKGIELLLSDSTNAE
VEGYTPGERSIIDNIDKLFLKAKGRIFITTFASNVHRIQYIIETAKKYNRKILILGRSVE
RIIKIIREMGHLKINDKQFIKVNDIGKYQPNEIMIISTGSQGEPMAALSRIANGKHLQIS
VIPGDTIIFSSSPIPGNKADVERLINKLTRVGAKVIESNSSNKIHTSGHASQEEQKLLFS
LLRPHYFMPMHGEFRMLKKHVETAESVNLLPGHGFVLANGDQLELLRGKAQIGKRIDADA
IYVDGKDMTGQASNVIRERDILSSDGLIAVVVSIDSQTNKLLSQPKIISRGSFYVRESGN
IIGESINIVTNAMLEVLNSSKPTFGAMKQAIKASLSPYIFKTKKRNPLIIPVILNQKSKI
PQNPKK
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaacgatattaaaattaatatccctgtaaacaaggaagttctagaaaaagaa
gttctagaagcaagtgatataaagccttttgtgttcaaacaaaaggaaataaaaagacac
tatcaaaataccaaaatcccaaccaaagtctttgcccttggtggtttagaagaaatcggg
aaaaacacttatgcaattgaatatgatcaagaaattattttaattgatgcgggggttaaa
ttccctgatgcaacaatgttgggtgtgagtgctgtgattcctgattattcttatttaaaa
gaaaatgaatctaaaattaaagcactttttattactcatggacatgaagatcacattggt
ggaattcattatttagtccaacaagtaaagattccagttatttttgccccatcattagcg
gctgctttaattcgtgaccgcttaaaggaatataaaattacagacaaaacagttgtcaaa
gaatatttatctgatgatgtatgaaaatcagcaaattttagagtaacctttgctgcttta
aaccactcaattcctgatgcttttggaattttagttgaaactccaaatggaaatattttt
tcaactggggattataaattcgactgatcaccattaggacattatgctgaattgaacaaa
ttagcagccatgggtgataaaggaattgagttattattatctgattcaaccaatgctgaa
gttgaagggtatacacctggagaacgcagtattattgataatattgacaaactattttta
aaagccaaaggtcgaatttttatcacaacctttgcttcaaatgttcaccgtattcaatac
attattgaaacagctaaaaaatacaaccgaaaaatcttaattttaggacgttctgttgaa
cgaattattaaaataattcgtgaaatgggtcacttgaaaattaatgataagcaatttatt
aaagttaatgacattggaaagtatcaaccaaatgaaattatgatcatttcaactggttca
caaggtgaaccaatggctgcgctttctcgaattgccaatggaaaacacttacaaataagc
gtcattcctggagatacaattattttttcatcatcaccaattcctggaaataaggctgac
gttgaaagattaattaataaattaaccagagttggggccaaagtgattgaatcgaactct
tcaaataaaattcatacttcaggacatgcgagtcaagaagaacaaaaattgttattctca
cttttaagaccacattacttcatgccaatgcatggtgaatttaggatgttgaaaaaacat
gttgaaactgctgaaagtgttaacttattaccaggacatggatttgttctagccaatggt
gatcaattagaacttttaagagggaaagcacaaattggtaaaagaattgatgctgatgca
atttatgttgatggaaaagacatgactggacaagcaagtaacgtgattcgtgaacgtgat
attttaagtagtgatggattgatcgcagttgttgtttcaatcgattcacaaacaaacaaa
ctattaagtcaaccaaaaattattagtcgtggaagcttttatgttcgtgaatcaggaaat
attattggtgaatcaattaatattgtgaccaatgcaatgttagaagttttaaattcatct
aaaccaacgtttggggcgatgaaacaagcgattaaagctagtttatcaccttacattttc
aaaacaaaaaaaagaaatcctttgattattccagtaattttaaatcaaaaaagtaaaatt
ccgcaaaatccaaagaaataa
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