Williamsoniiplasma luminosum: ELUMI_v1c05600
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Entry
ELUMI_v1c05600 CDS
T05209
Symbol
deaD
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
elj
Williamsoniiplasma luminosum
Pathway
elj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
elj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ELUMI_v1c05600 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elj03019
]
ELUMI_v1c05600 (deaD)
03009 Ribosome biogenesis [BR:
elj03009
]
ELUMI_v1c05600 (deaD)
Enzymes [BR:
elj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ELUMI_v1c05600 (deaD)
Messenger RNA biogenesis [BR:
elj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ELUMI_v1c05600 (deaD)
Ribosome biogenesis [BR:
elj03009
]
Prokaryotic type
rRNA helicases
ELUMI_v1c05600 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Utp25_C
DUF6438
Motif
Other DBs
NCBI-ProteinID:
ATZ17284
UniProt:
A0A2K8NU35
LinkDB
All DBs
Position
645155..646864
Genome browser
AA seq
569 aa
AA seq
DB search
MAFKKLELNDSILRSLEKNGFTKPTEIQEKGIPVFLENKNLFGKSSTGTGKTASFALPIL
HKIDVTDKKVQAVVMAPTRELALQILDQFKKFSSMMANVQIAPLIGGARMGDQIAKLKNC
QIVVGTPGRINDHINRKTLRLDNVKIIILDEADEMLKLGFKNDIDAVFNGVENKVQIGLY
SATISPKVLAIANKYMGEYEFIEVQNQMDVNNNINNTYVITKGYKKEDVMVKLIEKHNMQ
RFIIFTNTRANTTKISRVLDQAGIKNEVINGDKKQSQRTRVMRDFKTSRFRALIATDVVA
RGIHVDGIDYVINFEMPVDDEYFVHRIGRTGRNNETGSTITFINSINAVRHLNHVIKEFN
LEIDEELIDDIGLEKSKDMDRPEIHDKYRPRTSYADRRDSGRGNSRGGSRSGSRDGQRSD
SRGGSRSGSRDGSRNNSWGDKKPSSRSNSWSDRGASRDGAQSESRTNSRDDSRSNSWGDS
KPSSRSNSWGDKKPTSRDGARSDSRSNSWGDKKPSSRDGARSDSRSNSWGDKKPSSRSNS
WSDSKPKRSSNRDGFDGGSKPGKNFRNDK
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggcttttaaaaaattagagttgaacgattcaatcttaagatcacttgagaaaaatgga
tttactaaaccaacagaaatccaagaaaagggaattcccgttttcttggaaaacaaaaac
ttattcggaaaatcaagcacaggaactggaaaaacagcttctttcgctttaccgatttta
cataaaatagatgtaacagataaaaaagtacaagcagtggtgatggcaccaaccagagaa
ctagctttacaaattttggaccaattcaaaaaatttagttcaatgatggcaaatgtgcaa
attgcaccattaattggtggagcaagaatgggtgaccaaattgctaaattaaaaaattgt
caaatcgtggtcggaacaccaggaagaattaatgatcacattaaccgtaaaacattacgt
ttagataatgttaaaataattattcttgatgaagctgatgaaatgctaaaattaggattc
aaaaatgatattgacgctgttttcaacggtgttgaaaacaaagttcaaattggattatat
tcagcaacaatttcaccaaaagttttagcaatcgcaaataaatatatgggtgaatacgag
tttatcgaagttcaaaaccaaatggatgtaaacaacaacatcaacaacacttatgtaatt
actaaaggttacaaaaaagaagatgtaatggttaaattaatcgaaaaacacaacatgcaa
agatttattatctttaccaatactcgtgctaacacaactaaaatttctcgtgttttagac
caagctggaattaaaaacgaagtaattaatggagataaaaaacaatctcaaagaacaaga
gtgatgagagattttaaaacaagtcgttttagagctttaattgcaactgacgttgttgct
cgtggaattcacgttgatggaattgattatgtgattaactttgaaatgcctgtggatgac
gaatattttgttcaccgtattggaagaactggaagaaacaacgaaactggatcaacaatt
actttcattaatagtattaatgcagttagacatttaaaccatgtgattaaagaatttaat
ttagaaattgatgaagaattaattgacgatattggtttggaaaaatcaaaagacatggac
cgtcctgaaattcatgacaaataccgtccaagaactagttatgctgacagaagagattct
ggtcgcggaaacagtcgtggtggttcaagaagtggatcaagagatggtcaacgatcagac
tcacgtggtggatcaagaagtggttcaagagatgggtcaagaaacaattcttgaggggat
aaaaaaccaagttcaagaagcaattcatgatctgatcgaggagcatcaagagatggagct
caatctgaatcaagaactaattcaagagatgactcaagaagcaattcttgaggtgattca
aaaccaagttcaagaagtaattcttgaggagataagaaaccaacttcaagagatggagca
agatctgattcaagaagcaattcttgaggggacaaaaaaccaagttcaagagatggagct
agatctgattcaagaagtaattcttgaggtgataaaaaaccaagctcaagaagtaattca
tgaagtgattcaaaacctaaacgttcatcaaatcgtgatggatttgatggtgggtcaaaa
cctggaaaaaatttcagaaacgataaataa
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