Enhydra lutris kenyoni (northern sea otter): 111140866
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Entry
111140866 CDS
T05871
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
elk
Enhydra lutris kenyoni (northern sea otter)
Pathway
elk03440
Homologous recombination
elk03450
Non-homologous end-joining
elk04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
elk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111140866
03450 Non-homologous end-joining
111140866
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
111140866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
elk03032
]
111140866
03400 DNA repair and recombination proteins [BR:
elk03400
]
111140866
DNA replication proteins [BR:
elk03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
111140866
DNA repair and recombination proteins [BR:
elk03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
111140866
BRCA1-C complex
111140866
NHEJ (non-homologous end-joining)
MRX complex
111140866
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
SMC_N
DUF2703
AAA_29
Motif
Other DBs
NCBI-GeneID:
111140866
NCBI-ProteinID:
XP_022348804
UniProt:
A0A2Y9IS54
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGEVIAVQRSMVCTQKSKKTEFKTLEGVITR
TRHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQITSKEAQLTSSKEI
VKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALDSRKKQMEKDNSELEQKMEKVFQGT
DEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKESRLLNQEKSELLVEQGRLQLQADRH
QEHIQARDSLIQSLATQLELDGFERGPFNERHIKNFHKLVRERQEREAEIASQLMNDFAE
KETLKQKQIDEIRDKKTGLGRIIELKSEILTKKQNELRNVKHELQQLEGSSDRILELDQE
LSKAERELSKAEKNSNVEALKTEVINLQNEKADLDRTLRKLDQEMEQLNYHTTTRTQMEM
LTRDKADKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASSEQNKNHINNELKGKEERLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQDTLLGTIMP
EEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGLDLDRTVQQINQEKQEKQHKLD
TVSSKMELNRKLIQDQQEQIQHLKSTTNELKSEKLHISTNLQRRQQLEEQTVELSTEVQS
LFREIKDAKEQLSPLETTMEKFQQEKEELINKKNKSNKIAQDKVNDIKEKVKNIHGYMKD
IENYIQDGKDDYKKQKENELNKVIAQLNEYEKHKENINKDMGIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEEKIDNIKRNHSLAVGRQRG
YEEEIIHFKRELQEPQFRDAEEKYREMLIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRNTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVDKFYRIKKNIDQCSEIVKCSVSSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggatcgaaaagatgagcattttgggcgtgcggagttttggaatagaggacaaa
gataagcaaattatcacttttttcagccccctcacaattttggttggacccaatggggcg
gggaagacgaccatcattgaatgtctcaaatatatttgtactggagattttcctcctgga
accaaaggaaatacatttgttcatgatcccaaggttgctcaagaaacagatgttagagcc
cagattcgtctgcagtttcgtgatgtcaatggagaagttatagctgtacagagatctatg
gtgtgtactcagaaaagcaaaaagacagagtttaaaaccctggaaggagtcattactaga
acaaggcatggtgagaaggtcagtctcagctctaagtgtgcagaaattgaccgagagatg
ataagttctcttggggtttccaagtctgtgctaaataatgtcattttttgtcatcaagaa
gactctaattggcctctaagtgaagggaaggctctgaagcaaaaatttgatgagattttt
tcagcaacaaggtacattaaagccttggaaacacttcggcaggtacgtcagacacaaggt
cagaaggtaaaagaatgtcaaacagaactaaaatatttgaagcaaaataaggaaaaagct
tgtgagatacgtgaccagattactagtaaggaagctcagttaacatcatcaaaggaaatt
gtcaaatcctatgagaacgaacttgatccattgaagaatcgtctaaaagaaattgaacaa
aacctctctaaaataatgagacttgacaatgaaattaaagccttggatagccggaagaag
caaatggagaaagataatagtgaactggaacagaaaatggaaaaggtttttcaagggact
gatgagcaactaaatgatttatatcataatcaccagagaacagtaagggagaaagaaagg
agactggtagactgtcagcgtgaactggaaaagttaaataaagaatcaaggcttctcaat
caggaaaaatcagaactgcttgttgagcagggtcgtttgcagctacaggcggatcgccat
caagaacatatccaagctagagattcattaattcagtctttggcaacgcagctagaattg
gatggctttgagcgtggaccattcaatgaaagacatattaaaaattttcacaaacttgtg
agagagaggcaagaaagggaagcagaaattgccagccagctgatgaatgactttgcagaa
aaagaaactctgaaacaaaaacagatagatgaaataagggacaagaaaactggactggga
agaataattgagctaaaatcagaaatcctaactaagaagcagaatgagctgagaaatgtg
aagcatgaattacagcagttggaaggatcttcagacaggattcttgaactagaccaggag
ctctcaaaagctgaacgtgagttaagcaaggctgagaaaaacagcaatgtagaagctcta
aaaacagaagtaataaaccttcaaaatgagaaagcagacctagacaggaccctgcgtaaa
ttggaccaggagatggaacagttaaactatcatacaacaacacgtacccagatggagatg
ctgaccagagacaaagctgacaaagatgaacaaatcaggaaaataaaatctcgacacagt
gatgaattaacttcattgttaggatattttcccaacaaaaaacagcttgaagactggctt
catagtaaatcaaaagaaattaatcagaccagggacagacttgccaaattgaacaaagaa
ctagcttcatctgagcaaaataaaaatcatataaataatgaactaaaagggaaagaagaa
cggttgtccagttatgaagacaagctgtttgatgtttgtggtagccaggattttgaaagt
gatttagacaggcttaaagaagaaattgaaaaatcctcaaaacagcgagccatgctggct
ggagccacagcagtttactcccagttcattactcagctaacagatgaaaaccagtcatgt
tgccctgtctgtcagagggtttttcagacagaagctgaattacaggaagtcatcagtgat
ttgcagtctaagctgcggcttgctccagataaactgaagtcaacagaatcagaactaaag
aaaaaagaaaaacggcgtgacgaaatgctgggacttgtccccatgaggcaaagcataatt
gatttgaaggagaaggaaataccagaattaagaaacaaactgcagaatgtcaatagagac
atacagcgcttaaagaatgacatagaggaacaggatacactcttgggcacaataatgcct
gaagaagaaagtgctaaagtctgcctgacagatgttacaattatggagaggttccagatg
gaacttaaagatgttgaaagaaaaattgcacaacaagcagctaagctgcaaggactagac
ttggatagaactgttcaacaaataaaccaggaaaaacaagaaaagcaacacaaattagat
acagtttccagtaagatggaattgaatcgtaaacttatacaggaccagcaggaacagatc
caacaccttaaaagtacaacaaatgaacttaaatcagagaaacttcatatatctactaat
ttacaacgtcgtcagcaactagaggagcagactgtggaattatccactgaagttcagtcc
ttattcagagagataaaggatgctaaagagcagttaagccctttggaaacaacaatggag
aaattccagcaggaaaaagaagaattaatcaacaaaaaaaataaaagtaacaaaatagcc
caggataaagtgaatgatatcaaagaaaaggttaaaaatattcatggttatatgaaagac
attgagaattatattcaagatgggaaagatgactataagaagcaaaaagaaaatgaactt
aataaagtaatagctcaactaaatgaatatgagaaacacaaagaaaatataaataaagac
atgggaatcatgagacaagatattgatacacagaagatacaagagagatggctacaggat
aaccttactttaagaaaaagaaatgaggaactaaaagaagttgaagaagaaagaaaacag
catttgaaggaaatgggtcaaatgcaggttttacaaatgaagaatgaacatcagaagttg
gaagaaaaaatagacaatataaaaagaaatcacagtttggcagtagggcgacaaagaggt
tatgaggaagaaattattcattttaagagagaacttcaagaacctcaatttcgggatgca
gaggaaaagtacagggaaatgctgattgttatgagaacaacagagctcgtgaacaaggat
ctggacatttattataagacccttgatcaagcaatcatgaaatttcacagtatgaaaatg
gaagaaatcaacaaaattattcgtgacctttggcgaaatacctatcgtggacaagatatt
gaatacatagaaattcgatctgatgccgatgaaaatgtatcagcctctgataaaaggcgg
aattacaactaccgcgtggtaatgctaaaaggagacacggccttggatatgcgaggacga
tgcagtgctggacaaaaggtgttagcctccctcatcattcgcctggccttggctgaaacg
ttctgcttgaactgtggcatccttgccttggatgagccaacaacaaatcttgaccgagaa
aacattgagtctcttgcacatgctcttgttgagataatcaagagtcgctcgcagcagcgc
aacttccagcttctggtcatcacgcatgatgaagattttgtggagctcttaggccgctct
gaatatgtggataaattctacaggattaagaagaacattgatcagtgctcagagattgtg
aaatgtagtgttagctccctgggttcttatgttcattaa
DBGET
integrated database retrieval system
