Enhydra lutris kenyoni (northern sea otter): 111140947
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Entry
111140947 CDS
T05871
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
elk
Enhydra lutris kenyoni (northern sea otter)
Pathway
elk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
elk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111140947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
elk03041
]
111140947
Enzymes [BR:
elk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111140947
Spliceosome [BR:
elk03041
]
Complex A
U2 snRNP components
U2 related factors
111140947
Complex B
111140947
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
FAM176
Motif
Other DBs
NCBI-GeneID:
111140947
NCBI-ProteinID:
XP_022348925
UniProt:
A0A2Y9ISI3
LinkDB
All DBs
Position
Unknown
AA seq
1040 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS
RSRDRKRLRRSRSRERERSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKAENRSRS
KEKTDSGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME
NIGELKKEIEEMKQGKKWSLEDDDGAPDSSILDDEDDPAEAEKEGNEMEGEELDPLDAYM
EEVKEEVKKFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAM
EYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNV
FRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDL
IGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTL
GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD
RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSD
VEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGG
IDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGR
AGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKKSSG
FSGKGFKFDETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAA
PGTSSVPAPTAGNAEKLEIAKRLALRINAQKNLGIESQVDVMQQATNAILRGGTILAPTV
SAKTIAEQLAEKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEINDFPQTARWKVTS
KEALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKE
ELIRLQNSYQPTNKGRYKVL
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggagtctcgccactatcggaagcgatcagcgtcaagggggcgctctggaagt
cgttctagaagtcgctcaccctcagacaaaagaagtaaacgtggagatgatagacgttct
agaagcagagatagagataggaggagagagaggtctcgaagcagagataaaagaagatct
cggtcaagagaccggaagcgcctgaggcgttccagaagtagagagagagagagaagtcga
gagcgaagaagatctcgaagtcgagacaggagacgctcgaggagtagaagccgaggccgg
cgatccagatcctccagtcctggcaataaaagcaagaaagctgagaataggtctaggtcc
aaagagaaaacagatagtggggaaagttctaaagagaagaaaaaagacaaagatgacaaa
gaagatgaaaaagaaaaagatgctggcaactttgatcagaataagctggaagaagaaatg
agaaagcgaaaagagagagtagaaaaatggcgagaagagcaacgtaaaaaggccatggaa
aacataggggaactgaaaaaagaaattgaagagatgaaacaagggaaaaaatggagctta
gaagatgatgatggcgcccctgattcttctattttagatgatgaagatgatcctgcagag
gctgaaaaggaaggaaatgaaatggagggtgaggagttagatccattagatgcttacatg
gaagaagtaaaagaggaagtaaagaagtttaatatgagaagtgtgaaaggtggtggggga
aatgaaaagaagtctgggccaacagtcacaaaagttgtcactgttgtgacaaccaaaaaa
gcagtggtagattctgataagaagaaaggtgagctgatggagaatgaccaggatgccatg
gagtattcttcagaagaggaagaagttgatcttcagacagctcttacaggatatcagaca
aaacagagaaagcttctagaaccagtggaccatggaaaaattgaatatgaaccattcaga
aaaaacttttatgttgaagttccagaattagcaaaaatgtctcaagaggaggtcaatgta
tttcggttggaaatggagggcattactgtcaagggaaaaggttgccccaaaccaattaaa
tcttgggtccagtgtggaatttccatgaagatcttaaattctctcaaaaagcatggctat
gaaaagcccacgccaatccaaactcaggcgattcctgctataatgtctggacgagatttg
attggtattgccaagacaggaagtggaaagaccattgcttttctcttacccatgtttaga
cacatcatggatcaaaggtcattagaagaaggagaggggccaatagctgtcatcatgact
ccaactcgagaactggctttacaaattactaaagaatgtaagaagttttcgaagaccctg
ggacttagagtggtgtgtgtttatggaggaacaggaatcagtgagcagattgctgagctg
aaaagaggtgctgaaattattgtttgcacacctggtcgaatgattgacatgttagcagct
aacagtggtcgggtcacaaatcttcggagagtgacatacgtggttttagatgaagcagac
agaatgtttgacatgggttttgaaccacaggtcatgcgcattgtggataatgtccgtcct
gatcgacagacagttatgttttcagctacttttcccagagctatggaggctttggctcgc
cgaatcttgagtaaacccattgaagtgcaagttggaggcaggagtgtggtttgctcagat
gtggaacaacaagtgattgtgattgaagaagaaaagaaattcttgaagttacttgagctt
cttggccattatcaagaatcaggatctgtcattatatttgtggataagcaggaacatgct
gatggtcttctgaaagatttaatgagagcatcttatccttgcatgtctcttcatggaggc
attgatcaatatgacagagatagcatcataaatgactttaagaatgggacctgcaaactt
ctcgtagctacatctgttgctgctcggggtctagacgtgaaacatctgattcttgtagta
aattacagctgccccaaccattatgaggattatgtgcacagagcaggacggactggaaga
gcaggcaataaaggttatgcatatacttttatcacagaagatcaagctcgctatgcaggt
gacataattaaagctcttgaattgtcgggaactgcagtgcctcctgatctggagaaactt
tggagtgatttcaaagatcagcagaaagctgaagggaaaataattaaaaagagtagtggg
ttctctggtaagggattcaagtttgatgaaacagaacaagctttggctaatgagaggaaa
aagttgcaaaaagcggctctcggtctgcaagattcagatgatgaggacgctgcagttgac
attgatgaacaaattgaaagtatgtttaattcaaagaagagagttaaagatatggctgct
cctggaacatccagtgttcctgctccaactgcaggaaatgctgagaaattagaaattgct
aagagattggctcttagaatcaatgctcagaagaatttgggcattgagtctcaggtagat
gtgatgcaacaggccaccaatgcaattctcagaggtggcaccatcctggctcccactgtg
tctgccaaaaccattgcagagcaacttgctgaaaagattaatgccaagctcaattatgtg
cctttggagaaacaagaagaggagagacaggatggtggacagaatgaatcttttaagaga
tatgaagaagaattagagatcaatgacttcccacagactgctaggtggaaggttacctct
aaggaagctctgcagagaatcagtgaatattctgaagctgcaattacaatcagaggaaca
tatttcccacctggaaaagaacctaaggaaggagagcggaaaatttacttggcaattgaa
agtgccaatgaactggctgtgcagaaagcaaaggcagaaatcaccaggcttataaaagaa
gaactgattcggctgcaaaattcataccaaccaacaaataaaggaagatacaaagtctta
taa
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