Enhydra lutris kenyoni (northern sea otter): 111141974
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Entry
111141974 CDS
T05871
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
elk
Enhydra lutris kenyoni (northern sea otter)
Pathway
elk03015
mRNA surveillance pathway
elk03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
elk00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111141974
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
111141974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elk03019
]
111141974
Messenger RNA biogenesis [BR:
elk03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
111141974
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
111141974
NCBI-ProteinID:
XP_022350572
UniProt:
A0A2Y9IPB5
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV
GDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRAN
GQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQM
SGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPGNLIKHLVK
GTRPLFLETRIPWHMGHSIEEIPIFGLKAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPL
AGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPF
PPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDP
YGRPPPYDRGDYGPPGREMDTARTPLSEAEFEEIMNRNRAISSSAISRAVSDASAGDYGS
AIETLVTAISLIKQSKVSADDRCKVLISSLQDCLHGIESKSYGSGSRRRERSRERDHSRS
REKSRRHKSRSRDRHDDYYRERSRERERHRDRDRDRDRERDREREYRHR
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggtgtggaccacatagacatttacgcggatgtgggcgaagagttcaaccag
gaagctgaatatggtgggcatgatcagatagatttgtatgatgatgtcatctctccatct
gcaaataatggagatgccccagaagaccgtgattacatggatactctcccaccaactgtt
ggtgatgatgtgggtaaaggagcagcaccaaatgttgtctatacgtatactggaaagaga
attgcattgtatattggaaacctaacatggtggacaacagatgaagacttaactgaagca
gtgcattctttgggagtaaatgatattttggagataaaattctttgaaaaccgggcaaat
ggccagtcaaaggggtttgcccttgttggtgttggatctgaagcatcctcaaaaaagtta
atggatctgttgcctaaaagagaacttcatggtcagaatcctgttgtaactccatgcaat
aaacagttcctgagtcaatttgaaatgcagtccaggaaaactacacaatcaggacaaatg
tctggggaaggtaaagctggtcctccaggaggcagttcacgtgcagcatttccacaaggt
ggtagaggacggggccgttttccaggggctgttcccggtggggacagatttcctggacca
gcaggaccaggagggccacccccaccttttccaggaaatttgatcaagcatcttgttaaa
ggaactcggcctttgttcctggaaactaggattccatggcatatggggcacagcatagag
gaaatacccatttttggcctaaaagctggacagactccaccacgtccacccttaggtcct
ccaggcccacctggtccaccgggtcctccacctcctggtcaggttctgcctcctccttta
gctgggcctcctaatcgaggagatcgccctccaccaccagttctttttcctggacaacct
tttgggcagcctccattgggtccgcttcctcctggccctccacctccagttccaggctac
ggccctcctcctggtccaccacctccacagcagggaccacctccacctccaggccctttt
ccacctcgcccacctggccctcttgggccaccccttacacttgctcctcctccgcatctt
cctggaccacctccaggtgccccaccaccagctccacatgtgaatccagctttctttcct
ccaccgactaacagcggcatgcctacatcagatagccggggtccaccaccaacagatcca
tatggccgacccccaccatatgataggggtgactatgggcctcctggaagggaaatggat
actgcaagaacgccattgagtgaagctgagtttgaagaaatcatgaatagaaatagggca
atctcaagcagtgctatttcaagagctgtgtctgatgccagtgctggtgattatgggagt
gctattgagacattggtaactgcaatttctttaattaaacaatccaaagtatctgctgat
gatcgttgcaaggttcttattagctctttgcaagattgccttcatggaattgaatccaag
tcttatggttctggatcaagaagacgtgaacgctcaagagagagggaccatagtagatca
cgagaaaagagtcggcgtcataaatcccgtagtagagatcgtcatgatgattattataga
gagagaagcagagaacgagagagacatcgggaccgggaccgagatcgggaccgagaacgg
gaccgagagcgcgagtatcgtcatcgttag
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