Enhydra lutris kenyoni (northern sea otter): 111142203
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Entry
111142203 CDS
T05871
Name
(RefSeq) collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
elk
Enhydra lutris kenyoni (northern sea otter)
Pathway
elk04151
PI3K-Akt signaling pathway
elk04510
Focal adhesion
elk04512
ECM-receptor interaction
elk04820
Cytoskeleton in muscle cells
elk04926
Relaxin signaling pathway
elk04933
AGE-RAGE signaling pathway in diabetic complications
elk04974
Protein digestion and absorption
elk05146
Amoebiasis
elk05165
Human papillomavirus infection
elk05200
Pathways in cancer
elk05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
elk00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
111142203
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111142203
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111142203
09142 Cell motility
04820 Cytoskeleton in muscle cells
111142203
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
111142203
09154 Digestive system
04974 Protein digestion and absorption
111142203
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
111142203
09162 Cancer: specific types
05222 Small cell lung cancer
111142203
09172 Infectious disease: viral
05165 Human papillomavirus infection
111142203
09174 Infectious disease: parasitic
05146 Amoebiasis
111142203
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
111142203
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
elk04147
]
111142203
00536 Glycosaminoglycan binding proteins [BR:
elk00536
]
111142203
Exosome [BR:
elk04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
111142203
Glycosaminoglycan binding proteins [BR:
elk00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111142203
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
111142203
NCBI-ProteinID:
XP_022350940
UniProt:
A0A2Y9IYD7
LinkDB
All DBs
Position
Unknown
AA seq
1669 aa
AA seq
DB search
MRPGTAPRPPVLLRLLLLVLLAAAPTTGKGCVCKDKGQCFCDGIKGEKGEKGFPGPAGSP
GQKGFPGPEGLPGPQGPKGSPGLPGFTGPKGLRGITGLPGFSGPPGLPGTPGHPGPYGPA
GVPGCNGSKGERGFPGLPGTPGYPGIPGAIGLKGEKGAPAAEDIELDGRGDPGLPGVPGF
QGLPGLPGFPGPVGPPGPPGFLGFPGPMGPPGPKGLMGDNVIGQKGEQGVKGLTGPPGPP
GTVIVTLTGPDNRTNLKGEKGDKGAMGKSGPPGPSGPPGESYGSQKGAPGEPGPQGKPGK
DGAPGFPGTEGAKGNRGFPGLRGEDGIKGWKGDIGPPGFRGPTEYYDAYQEKGDEGLPGP
PGPKGARGPQGPRGSPGVPGIAGSSRPGLRGAPGPPGVKGSKGERGPPGKNAVGPPGSSG
CPGSPGPIGLPGYPGPPGDIVFRKGPPGSGGFPGLIGFPGIPGADGPKGEPGLLCIQCPC
IPGPPGLPGLPGLDGIKGIPGGQGAAGIKGSPGSPGSAGLPGSPGFPGAPGDPGLKGEKG
EASQPEGEVGAPGDPGLRGHPGRRGLDGIPGTPGIKGSPGPKGEPALSGEKGDQGPLGDP
GIPGSPGPAGPPGPANYGPRGEPGPKGTQGVPGAPGPPGEAGPKGEFSISTPVPGPPGPP
GPPGRAGPQGPPGIPGSRGKCDPGLPGPDGEPGIPGIGFPGPPGPKGEQGFPGVKGAPGC
PGEMGKPGPPGEPGLPGAKGEPGLAMPGQPGTPGFPGERGISGENGEIGFPGPPGLPGIP
GTGGVGGPQGDPGKPGPPGEKGPPGRCTEGPRGAQGLPGLNGLEGQPGRRGETGPKGDPG
IPGLDRSGFPGEPGPPGMPGHRGAMGPPGQKGYPGNPGFLGPPGEKGMMGMMGYPGDTGP
PGPPGNPGAPGQRGSFGIPGAKGEKGPPGTKGEEGDKGPRGPSQISTLLGDKGEPGLKGF
AGKPGEKGNRGIPGLPGLKGPEGPPGPPGPPGPRGDSGSVGNPGQPGPHGGPGSMGNMGV
PGPKGHRGALGLPGLTGRPGLPGVHGLRGDKGEPGYSAGTRPGPPGPKGDPGLPGDMGRK
GERGLPGTPGHLGPAGTEGAPGNPGSPGHPGKPGPDGDLGLKGIKGFPGSPGVKGPPGPP
GYPGPPGPMGMRGSQGRDGIPGPAGEKGETGLLGAPPGPRGSPGVPGAKGDRGAPGLPGL
PGRKGAVGDTGPRGPTGIMGLPGPPGFPGAIIPGQKGNRGPPGFRGNPGEPGPPGPPGSH
VRGIKGDKGIMGEPGPRGLPGTIGAEGPPGPPGAPGSPGLPGLRGDPGFHGFPGVKGEKG
NPGFLGPAGPPGQIGPKGPPGVHGDPGTVKIISLPGSPGPPGRAGGPGMQGEPGPPGPPG
ILGPCGPRGKPGKDGRPGTPGPIGEKGNKGCKGEKGPPGSDGLPGLKGKPGHIGPPATGP
MRRGFVFTRHSQTTVIPSCPEGTEPLYSGFSLLFVQGNEQAHGQDLGTLGSCLQRFTTMP
FLFCNINDVCNFASRNDYSYWLSTPAPMPMDMAPITGRALEPYISRCTVCEGPTNAIAIH
SQTTAIPSCPNGWISLWKGFSFIMFTSAGSEGAGQALASPGSCLEEFRASPFIECHGRGT
CNYYSNSYSFWLASLNPQRMFRKPIPSTVKAGELEKIISRCRVCMKRRQ
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccggggactgcgcccaggccgcccgtgttgctgcggctgctcctgctggtgctc
ctggcagcggcgccaacgacaggcaagggctgtgtctgtaaagacaaaggccagtgcttc
tgtgatgggatcaaaggggagaagggggagaaaggctttcctggacccgctggttctcct
ggccagaagggattcccaggtcccgaaggcttgcctggaccacagggacccaagggctca
ccaggactcccaggattcactggtcccaaaggtttgaggggaataacaggattgccggga
ttttcaggtcctcctggacttccaggcaccccgggccatcctgggccctatggacctgcc
ggtgtcccaggatgcaatggttctaagggtgagcgagggtttccaggccttccagggaca
ccagggtacccggggatcccgggtgctattggtttgaaaggagaaaagggtgcccctgct
gcagaagatatagaacttgatggaagaggtgaccctgggttgccaggagttccgggattc
cagggtttgccaggccttccaggctttccgggacctgttggtccacctggccctccagga
ttcttaggctttccaggacccatgggacctccaggacctaagggtctcatgggcgataat
gtgataggacaaaaaggagagcagggtgtaaaaggattaacaggaccccctggaccacca
ggaacagttattgtgacactaaccggcccagataacagaacgaacctcaaaggggagaag
ggagacaagggagccatggggaaatctggacctcctggaccctcgggaccgcctggagaa
tcttatggatctcaaaagggtgctcctggagaacctggcccgcagggaaaacccggcaaa
gatggtgcccctggtttccccggcactgagggagccaaaggcaacaggggcttccctggg
ttacggggtgaagacggcattaaggggtggaaaggggacattggccctccaggatttcgt
ggtccaacagaatattatgatgcataccaggaaaaaggagatgaaggacttccaggccca
ccaggccctaaaggagctcgtggcccacaaggtccccgtggctctcctggggttcctgga
attgctgggtcatcaaggcctggcctcagaggagcccctggacctccaggcgtgaaagga
agtaaaggggaacgagggcccccaggaaagaatgcagtggggcctcccgggtcctcgggt
tgtcctggctcgccaggacctatagggttgccaggatatccaggaccaccaggtgacatc
gtttttcgcaaaggtccacctggaagtggtggattcccaggccttatagggtttccagga
atcccaggagctgatggtcccaaaggggaacctggcctcttgtgcatacagtgtccttgt
atccccgggcccccgggcctcccaggactgccagggttggacggcataaaaggaatccca
ggaggccaaggggcagctggcattaaaggaagcccagggtccccgggaagtgcgggtctt
ccaggatctccaggattcccgggtgctccgggggatccaggacttaaaggagaaaaaggt
gaagcatcgcagcctgagggagaagtgggtgccccaggggaccctgggctcagagggcat
cctggaagaaggggcttggatggaattcctggaactcccgggatcaaaggatcaccagga
cccaaaggtgaaccggccctgagtggtgagaagggggaccagggtcctctgggggatcct
ggcatccctgggtccccaggacctgcaggaccacctggaccagcaaactatggaccacgg
ggagaacctggtccaaagggcacacaaggagttcctggagcccctggaccacctggagaa
gccggtcctaagggagaattcagtatttcgacaccagtcccagggccaccaggacctccg
gggccccctggccgtgctggcccccaaggtccacccggtatccctggatccagaggaaaa
tgtgatccgggtcttcctgggcctgatggtgaaccaggaattccaggaattggcttccct
gggccccctggacctaagggagagcaaggttttcctggagtaaaaggagcaccgggttgt
ccaggagaaatggggaagcccgggccacccggagaaccaggtctcccaggagccaaggga
gaaccaggactagccatgcctggacagccaggaacaccaggttttccaggagaaagaggc
atttctggggaaaatggagaaattggattccctggacctccaggtctccctggaattcca
ggaactggaggggttggtggaccccaaggggatccagggaagcccggaccacctggagaa
aaaggacccccaggaaggtgcacagaaggtcccaggggagcccaaggacttccaggatta
aatggattggaagggcaaccaggcagaagaggtgaaacagggccaaagggagacccaggt
attccaggcttggataggtcaggctttcctggagaacctggaccaccaggaatgccaggt
catcgaggcgcaatgggaccacctggtcaaaaaggatatccaggaaatccaggattttta
ggaccaccaggtgaaaaaggaatgatggggatgatgggctatccaggagatactggccct
cctgggccccctgggaaccctggcgccccaggacagaggggtagctttggaattccagga
gcaaagggtgagaaagggcccccaggaaccaagggggaagaaggagataaagggcctcgg
gggccttctcagatatccactttgctgggggacaaaggagaaccaggcctcaaaggattt
gctggaaagcctggtgaaaaaggaaacagaggcattccagggttaccaggtttaaaagga
ccggaaggaccacctggaccaccaggtccaccaggccccagaggggattcaggcagcgtt
gggaatcctggacaaccaggaccgcatggtgggccaggaagcatgggcaacatgggggtg
ccaggtcctaaaggacacaggggagctttgggactaccaggtttaaccggaagaccgggt
ctcccgggtgttcacggtctccgaggagataagggagagccaggttattcggcaggtaca
aggccaggaccaccgggaccaaagggagatccaggattgccaggtgacatgggaaggaaa
ggagaaagagggctacctggcacccctggacatttggggcctgctggaactgagggagcc
cctggaaatcccgggagtcctggccacccaggaaagccgggccctgatggtgatttgggg
ttaaaaggcatcaaaggcttccctggttctccaggagtcaaaggccctccaggacctcca
ggatacccaggacctcctggaccaatgggtatgagaggcagccagggacgtgatggaatt
cctggtccagccggagaaaagggagaaacaggtttgctgggggcacctccaggcccaaga
gggagccccggtgttccaggagccaaaggagacaggggcgccccgggcttacccggcctc
ccgggcaggaaaggggcagtgggagacaccggccctcggggacccactggcataatggga
ctcccagggccaccaggttttcctggcgcaatcatccctggccagaaaggaaatcgaggc
ccacctggcttcagaggaaacccaggtgagcccggtcctccgggacctccagggagccac
gtaagaggcatcaaaggagacaagggaatcatgggtgagcctggccccaggggtctgcct
ggaactataggagccgaagggccaccgggtccaccgggagcaccaggaagcccaggtctg
ccagggctcagaggtgatcctggattccatggatttccaggtgtgaaaggggagaagggt
aatccaggattcctgggaccagctggacctccagggcaaattgggcccaaaggaccacct
ggtgtacatggagaccctggcacggttaagatcatctcccttccaggaagcccaggacca
cctggccgtgctggaggaccagggatgcaaggagaacccgggccaccagggccaccggga
atcctaggaccctgtgggccgagaggtaagccaggcaaggatggaagaccaggaactcct
gggccaattggagaaaaaggcaacaaaggttgtaaaggagagaaaggaccacctggatca
gatggactgccaggcttgaaggggaaacctggacacattggacctcctgcaactgggcca
atgaggagaggcttcgtcttcaccaggcacagtcagacgacagtgattccctcctgtcca
gaaggaacagagccactctatagtggattttctcttctttttgtacaaggaaatgaacaa
gcccatggacaagacctgggaactctaggcagctgcctgcagcggtttaccacaatgccg
ttcttgttctgtaacatcaacgatgtatgtaattttgcatctcgaaatgattattcatac
tggctgtcaacaccagctccgatgccaatggacatggctccaattactggcagggccctg
gagccttatattagcagatgcactgtctgtgaaggtcctacaaatgccatagccattcac
agccaaaccactgccattccctcctgtcccaatggctggatttctctctggaaaggattt
tcgtttattatgttcacaagtgcaggttctgagggtgctgggcaagctctggcctcccct
ggctcctgcctggaagaattccgagccagtccattcatagagtgccatggaagaggaaca
tgcaactactattcaaattcctacagtttctggttggcttcattaaacccccaaagaatg
ttcagaaaacctattccgtcaactgtgaaagctggggagttagaaaagataataagtcgc
tgtcgggtgtgcatgaagagaagacaatga
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integrated database retrieval system
