Enhydra lutris kenyoni (northern sea otter): 111142399
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Entry
111142399 CDS
T05871
Name
(RefSeq) Niemann-Pick C1 protein
KO
K12385
Niemann-Pick C1 protein
Organism
elk
Enhydra lutris kenyoni (northern sea otter)
Pathway
elk03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
elk04142
Lysosome
elk04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
elk00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
111142399
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
111142399
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
111142399
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
elk02000
]
111142399
Transporters [BR:
elk02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
111142399
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
MMPL
ACR_tran
Folate_rec
Motif
Other DBs
NCBI-GeneID:
111142399
NCBI-ProteinID:
XP_022351167
UniProt:
A0A2Y9IR23
LinkDB
All DBs
Position
Unknown
AA seq
1276 aa
AA seq
DB search
MTARGPALSLLLLLLCPAQVLAQSCVWYGECGIASGDKRYNCQYSGPPKPLPKDGYDLMQ
ELCPGFFFDNVSVCCDVQQLRTLKDSLQLPLQFLSRCPSCFYNLMNLFCELTCSPQQSQF
LNVTETEDYVDPVTNQTKTNVKELQYYVGESFANAMYNACRDVEAPSSNDKALGLLCGKD
AGACNATNWIEYMFNKDNGQAPFTITPIFSDLPAHGMEPMNNATKGCDESVDEVTGPCSC
QDCLAVCGPRPQPPPPPAPWRILGLDAMYVIMWTTYMAFLLVFFGAVFAVWCYRKRYFVS
EYTPIDSNIAFSVNASDKGEASCCDVLGAAFEGWLRRLFSHWGSFCVRNPGCIVVFSLAF
IAACSSGLVFVRVTTNPVDLWSAPGSQARLEKEYFDTHFGPFFRTEQLIIQAPHTNTHTY
QPYPSGSDVPFGPPLDRGILHQVLDLQTAIENITAFYNNETVTLQDICLAPLSPYNKNCT
IMSVLNYFQNSHSMLDHEVGDDFFVYADYHTHLLYCVRAPASLNDTSLLHDPCLGTFGGP
VFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTEKLQRAQAWEKEFINFVKNYENPNLT
ISFTTERSIEDELNRESNGDVFTVLISYAVMFLYISIALGHIKSWSRFLVDSKISLGIAG
ILIVLSSVACSLGIFSYVGIPLTLIVIEVIPFLVLAVGVDNIFILVQTYQRDERLQGETL
DQQLGRVLGEVAPSMFLSSFSEAVAFFLGALSKMPAVHTFSLFAGMAVLIDFLLQITCFV
SLLGLDIKRQEKHRLDVLCCVRGSEDGTSVQASESCLFRFFKNSYSPLLLKDWMRPIVIA
VFVGVLSFSIAVLNKVEIGLDQSLSMPDDSYVLDYFRSLRYLHAGPPVYFVLEEGHDYSS
LKGQNMVCGGMGCNNDSLVQQIFTAAQLDNYTRIGFAPSSWIDDYFDWVKPQSSCCRVYN
GTDRFCNASVVDPACGRCRPLTPEGKQRPQGEDFMRFLPMFLSDNPNPKCGKGGHAAYSS
AVNILGNDTAVGATHFMTYHTVLQTSADFTDAMRKAILIAGNITKTMGLDGSGYRVFPYS
VFYVFYEQYLTIIDDTIFNLSVSLGAIFLVTLVLLGCELWSAVIMCVTIAMILINMFGVM
WLWGISLNAVSLVNLVMSCGISVEFCSHITRAFTVSTKGSRVQRAEEALSHMGSSVFSGI
TLTKFGGIVVLAFAKSQIFQIFYFRMYLAMVLLGATHGLIFLPVLLSYIGPSINKAKSLA
TQERYKGTEREQLLNF
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgcgcggcccagcgcttagccttctcctgctgctgctctgtcccgcgcaggtg
ttggcacagtcctgtgtgtggtatggagagtgtggaattgcgtctggagacaagaggtac
aactgccaatattcggggccaccaaaacccttgccgaaggacgggtatgacttaatgcag
gagctctgcccaggcttcttctttgacaacgtcagcgtgtgctgcgacgtgcagcagctg
cggaccctgaaggacagcctgcagctgcccctgcagtttctgtccagatgtccatcctgt
ttttataacctaatgaacctgttttgcgagctgacgtgtagcccccagcaaagtcagttt
ctgaatgttacagaaactgaagattatgttgatcctgttacaaaccagacaaaaacaaac
gtaaaagaattacagtactatgtcggagagagttttgccaatgccatgtacaacgcctgc
cgggacgtggaggccccctccagtaatgacaaagccctggggctcctgtgtgggaaggac
gccggggcctgcaatgccaccaactggatcgagtacatgttcaataaggacaacggccag
gcgccttttaccatcacacccattttctcagatcttccggcccatgggatggagcccatg
aacaacgccaccaagggctgtgacgagtctgtggatgaggtcacggggccgtgcagctgc
caagactgcttggccgtgtgtggccccaggccccagccgccaccccctccggctccctgg
agaatcttgggcctggacgccatgtatgtcatcatgtggaccacctacatggcgttcttg
cttgtcttctttggagcagtatttgccgtgtggtgctacagaaaacgctattttgtctcc
gagtacacccccattgacagcaacattgctttctccgtaaatgccagtgacaaaggggag
gcatcctgctgtgacgtgcttggggcggcattcgagggctggctgaggcggctcttctcc
cactggggctccttctgcgtccgcaacccaggctgcatcgtcgtcttctccctggccttc
atcgccgcctgctcgtcaggcctggtgttcgtccgggtcacgaccaacccggtggacctg
tggtcggcccccggcagccaggcgcgcctggagaaagagtacttcgacacgcatttcggg
cccttcttccgcacggagcagctcatcatccaggccccccacaccaacacgcacacatac
cagccgtacccctctggctctgatgtgccctttggacccccgctcgacagagggatcttg
caccaggttcttgacttacaaaccgccattgaaaacatcactgccttttacaacaacgag
accgtgacacttcaggacatctgcttagcccccctctcaccctataacaagaactgcacc
atcatgagcgtgttgaattacttccagaacagccattccatgctggaccacgaagtaggc
gatgacttcttcgtgtacgcagattaccacacgcacttgctatactgcgtacgggctcct
gcctctctgaatgataccagtttgctccatgacccttgcctgggtacgtttggtgggcca
gtgttcccgtggcttgtgttaggaggctatgatgatcaaaactacaataacgctacagcc
cttgtgattacctttcctgtcaataattactacaatgatacagagaagctccagagggcc
caggcctgggagaaagagtttattaattttgtgaaaaactacgagaatccaaatctgacc
atttctttcacgactgagcgaagtatcgaggatgaactgaatcgtgagagtaacggcgat
gtcttcactgtcctgatcagctacgccgtcatgtttctgtacatttccatagccttgggc
cacatcaaaagctggagcaggtttcttgtggattctaagatctcccttggcatcgctggg
atcctcatcgtgttgagctcagtggcatgctcactgggcatcttcagctacgttgggatc
cccctcaccctcattgtgatcgaagtcatcccattcctggtgctggctgtcggggtggac
aacatcttcattctggtccagacctaccagcgagatgaacgtcttcaaggagaaactctg
gatcagcagctgggcagggtcctaggagaagtggctcctagtatgttcctgtcctccttt
tcagaggctgtagcgtttttcttaggggcgctgtcaaagatgccagccgttcacactttc
tccctgttcgccgggatggccgtcctcattgacttccttcttcagattacgtgttttgtg
agtctcttggggttagacatcaagcgtcaagagaaacatcgtctggatgtcctttgctgt
gtcagaggctctgaagatggaactagtgtccaggcctcagaaagctgcttgtttcggttc
ttcaaaaactcctattctccacttctgcttaaggattggatgcgacctattgtgatagcg
gtatttgtgggtgtcctgtccttcagtatcgcggtgctgaacaaagtggaaattggattg
gatcagtctctctccatgcctgatgactcctacgtgctggattacttcaggtcgctcaga
tacctgcatgcgggcccacctgtgtacttcgtcctggaggaagggcacgactacagctcc
ctgaaagggcagaacatggtgtgcgggggcatgggctgcaataacgactccctggtgcag
cagatcttcaccgcggctcagctggacaactatacccgaataggctttgccccctcgtcc
tggatcgatgattattttgattgggtcaagcctcagtcttcttgctgtagagtctacaat
ggcacagatcgcttctgcaatgcctcagtggttgaccctgcctgtggtcgctgcagacct
ttaaccccagagggcaaacagaggcctcaaggggaagacttcatgagattcctgcccatg
ttcctttctgataacccaaaccccaagtgcggcaaagggggacatgctgcttacagttca
gccgttaacatccttggcaatgacacggctgtcggagccactcacttcatgacctaccac
actgtgcttcagacctctgctgactttactgatgccatgagaaaagccatcctcatcgcc
ggcaacatcaccaaaaccatgggcctcgatggaagcggttaccgtgtgttcccgtacagt
gtgttctatgtcttctacgaacagtacctgaccattatcgatgacacgatctttaatctc
agcgtgtccctgggagccatcttcttggtgaccctggttctcctgggctgtgaactgtgg
tctgcggtgatcatgtgtgtcactatcgccatgatcttgatcaacatgtttggcgtcatg
tggctctggggcatcagtctgaatgcggtttccttggtcaatttggttatgagctgtggc
atttcagtggagttctgcagccacatcacgagagcgttcacagtgagcacgaagggcagc
cgcgtgcaacgggccgaagaggcgctctctcacatgggcagttccgtgttcagtggaatc
acactaacaaaatttggagggattgtggtgctggcgtttgccaagtctcagatcttccag
atattctacttcaggatgtatctggctatggtcttactgggagccacccatggcttgata
ttccttcctgtcttactcagctacataggcccatctataaataaagccaaaagtttggcc
actcaagagcgatacaaaggtacagagcgagaacagctcctaaatttctag
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