KEGG   Enhydra lutris kenyoni (northern sea otter): 111142974
Entry
111142974         CDS       T05871                                 
Name
(RefSeq) histone deacetylase 1 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
elk  Enhydra lutris kenyoni (northern sea otter)
Pathway
elk03082  ATP-dependent chromatin remodeling
elk03083  Polycomb repressive complex
elk04110  Cell cycle
elk04213  Longevity regulating pathway - multiple species
elk04330  Notch signaling pathway
elk04350  TGF-beta signaling pathway
elk04613  Neutrophil extracellular trap formation
elk04919  Thyroid hormone signaling pathway
elk05016  Huntington disease
elk05031  Amphetamine addiction
elk05034  Alcoholism
elk05165  Human papillomavirus infection
elk05169  Epstein-Barr virus infection
elk05200  Pathways in cancer
elk05202  Transcriptional misregulation in cancer
elk05203  Viral carcinogenesis
elk05206  MicroRNAs in cancer
elk05220  Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:elk00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    111142974
   03083 Polycomb repressive complex
    111142974
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    111142974
   04350 TGF-beta signaling pathway
    111142974
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    111142974
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    111142974
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    111142974
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    111142974
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    111142974
   05202 Transcriptional misregulation in cancer
    111142974
   05206 MicroRNAs in cancer
    111142974
   05203 Viral carcinogenesis
    111142974
  09162 Cancer: specific types
   05220 Chronic myeloid leukemia
    111142974
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    111142974
   05165 Human papillomavirus infection
    111142974
  09164 Neurodegenerative disease
   05016 Huntington disease
    111142974
  09165 Substance dependence
   05031 Amphetamine addiction
    111142974
   05034 Alcoholism
    111142974
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:elk03036]
    111142974
Enzymes [BR:elk01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     111142974
Chromosome and associated proteins [BR:elk03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     111142974
   HDAC complexes
    Sin3A-HDAC complex
     111142974
    BRAF-HDAC complex
     111142974
    REST complex
     111142974
    SHIP complex
     111142974
    MiDAC complex
     111142974
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     111142974
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    111142974
  Chromatin remodeling factors
   NuRD complex
    111142974
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 111142974
NCBI-ProteinID: XP_022352050
UniProt: A0A2Y9J1U3
LinkDB
Position
Unknown
AA seq 521 aa
MVRSPGSSPTPLSQTLVQAQGALGCLSGLPLPPAEFRAVPAQADWLDPCPGCAAIGDVGN
YYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRP
DNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHH
AKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY
GEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVISKVMEMFQPSAVVLQC
GSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALD
TEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQM
QVIPEDAIPEESGDEDEEDPDKRISICSSDKRIACEEEFSDSDEEGEGGRKNSSNFKKAK
RVKTEDEKEKDPEEKKEVIEEEKTKEEKQEAKGVKEEVKLA
NT seq 1566 nt   +upstreamnt  +downstreamnt
atggtacggtccccgggcagctcccccacccccctgtcgcagaccttggtacaggcccag
ggggccctcggctgcctctcagggctgcccttgccccctgccgagttccgggccgtccct
gcgcaagctgattggctggatccgtgcccgggctgcgcggctataggagatgttggaaac
tactattacggacaaggccatccaatgaagcctcaccgaatccgtatgactcacaatttg
ctacttaactatggtctctaccggaaaatggaaatctatcgccctcacaaagccaatgct
gaggagatgaccaagtaccacagtgacgactacattaaattcttgcgctccatccgccca
gataacatgtctgagtacagcaagcagatgcagagattcaacgtcggtgaggactgtccg
gtatttgacggcctgtttgagttctgtcagttatctactggtggctctgtggcgagtgct
gtgaaacttaataagcaacagacggacatcgctgtgaattgggccgggggcctgcaccat
gcaaagaagtctgaggcatctggcttctgttacgtcaatgatatcgtcttggccatcctg
gaactgctgaagtatcaccagagggtgctgtatattgacattgatattcaccacggcgat
ggcgtggaagaggccttctataccacagaccgggtcatgactgtgtcctttcataaatac
ggagagtacttcccaggaactggggacctacgggatattggggctggcaaaggcaagtat
tatgctgttaactacccgctccgagatgggatcgatgacgagtcctatgaggccattttc
aagccggtcatatctaaagtgatggagatgttccagcccagtgcggttgtcttacagtgt
ggttccgactccctgtctggggatcggttaggttgcttcaatctgaccatcaaagggcac
gccaagtgtgtggagtttgtgaagagcttcaacctgcctatgctgatgctgggaggaggc
ggctacaccatccgtaatgtggcccgctgctggacgtatgaaacagcagtggcattggac
acagagatcccgaatgagcttccgtacaacgactacttcgaatactttggaccagatttc
aaacttcacatcagtccttccaatatgaccaaccagaataccaatgaatacctggagaag
atcaaacagcgactgtttgagaacctgagaatgctgccccatgcaccgggggtccaaatg
caggtgattcctgaggacgccattcctgaggagagtggtgacgaggatgaagaagatcct
gacaagcgcatctcgatctgttcttctgacaaacgaattgcctgcgaggaagagttctcg
gactctgatgaggagggggaaggcggtcgcaagaactcttccaacttcaaaaaagccaag
agagtcaaaactgaggatgaaaaagagaaagacccagaagagaagaaagaagtcatagaa
gaggagaaaaccaaggaggagaagcaagaagccaaaggggtcaaggaggaggtcaagttg
gcctga

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