Enhydra lutris kenyoni (northern sea otter): 111144449
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Entry
111144449 CDS
T05871
Name
(RefSeq) DNA polymerase beta isoform X1
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
elk
Enhydra lutris kenyoni (northern sea otter)
Pathway
elk03410
Base excision repair
elk05166
Human T-cell leukemia virus 1 infection
elk05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
elk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111144449
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
111144449
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
111144449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elk03400
]
111144449
Enzymes [BR:
elk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
111144449
DNA repair and recombination proteins [BR:
elk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
111144449
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
111144449
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_5
HHH
Cdd1
HHH_2
NTP_transf_2
DUF3900
Motif
Other DBs
NCBI-GeneID:
111144449
NCBI-ProteinID:
XP_022354474
UniProt:
A0A2Y9J430
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MSKRKAPQETLNGGITDMLTELANFEKNVNQAIHKYNAYRKAASVIAKYPHKIKSGAEAK
KLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIK
TLEDLRKNEEKLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLNEVKKVDSEYIATVCGS
FRRGAESSGDMDVLLTHPSFTSESTKQPKLLHRVVEQLQKVHFITDTLSKGETKFMGVCQ
LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRP
LGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacggaaggcgccgcaggagacgctcaacgggggaatcaccgacatgctcaca
gaactcgcaaacttcgagaagaacgtgaaccaggcaatccacaagtacaatgcttacaga
aaagcagcatctgtgatagcgaagtacccacacaaaataaaaagtggagcagaagctaag
aaattgcctggagtaggaacaaagattgctgaaaagattgatgaatttttagcgactgga
aaattgcgtaagctggaaaagattcggcaggatgacacaagttcatctatcaattttctg
actcgagttagtggcattggtccatctgctgcaaggaagtttgtagatgaaggaattaaa
acattagaagatctcagaaaaaatgaagaaaagttgaaccatcatcaacgaattgggttg
aaatattttgaggactttgagaaaagaattcctcgggaagagatgttacaaatgcaagat
attgtactaaatgaagttaaaaaagtggattctgaatacattgctacagtctgtggcagt
ttcagaagaggcgcagagtccagtggtgacatggacgttcttctgacccatccaagcttt
acctctgaatcgaccaaacagccaaagctgttacatcgtgttgtggagcagttacagaag
gtccattttattacagatactctgtcaaaaggtgaaacaaagttcatgggtgtttgccag
cttcccagtaaaaatgatgaaaaggagtatccacacaggagaattgatataaggttgata
cccaaggatcagtattactgcggtgttctctatttcactgggagtgatattttcaataag
aatatgagagctcatgccctagaaaagggcttcacaatcaatgagtacacaatccgtccc
ttgggagtcactggagtcgctggagagcctctgccagtggatagcgagaaagacatcttt
gactacatccagtggaaataccgagaacccaaggatcggagtgaatga
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