Enhydra lutris kenyoni (northern sea otter): 111145089
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Entry
111145089 CDS
T05871
Name
(RefSeq) collagen alpha-1(XVII) chain
KO
K07603
collagen type XVII alpha
Organism
elk
Enhydra lutris kenyoni (northern sea otter)
Pathway
elk04382
Cornified envelope formation
elk04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
elk00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
111145089
09158 Development and regeneration
04382 Cornified envelope formation
111145089
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Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
DUF2868
Motif
Other DBs
NCBI-GeneID:
111145089
NCBI-ProteinID:
XP_022355427
UniProt:
A0A2Y9J3K0
LinkDB
All DBs
Position
Unknown
AA seq
1466 aa
AA seq
DB search
MDVTKKNKRDGTEVTERIITETVTTRLTSLPPKGGTSNGYAKTGSLGGGSRLEKHSLTHG
SSGYINSSGSTRGNASTSSYRRAHSPASTLPNSPGSTFERKTHITRHGTYEGSSSGNSSP
EYPRKELASSSTRGRSQTRESEIRVRLQSASPSTRWTELDDVKRLLKGSRSASVSPTRNS
SNTLPIPKKGTVETKMVTASSQSVSGTYDATILDANLPSHMWSSTLPAGSSMGTYHNNVT
TQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGVSSCSSVFGMQNNLAPSSSALSHGTA
TTSTAYGVKKNLPQSPGVVSTGVSTSAACTTNVQSDDVLHKDCKFLILEKDNTPAKKEME
LLIMTKDSGKVFTASPASIAATSFADDTLKKEKQAAYTADTCLVSEANGDVKTVSTKGKA
ASAEMHNYNHRGGGGGGGGGGGLWGAAPAWCPCGSCCSWWKWLLGLLLTWLLLLGLLFGL
IALAEEVRALKARVAALEQGRGDVLLYDQKMDRASKDRLLGTAPGVGADAGGLGLDHHSQ
EVLWLFVRDKLKAEQESGNLRGSPGPKGDMGSQGPKGDRGLPGTPGLPGLLGHPGPEGPK
GQKGSVGEPGMEGPMGQRGREGPMGPRGEPGPPGFGEKGDRGAAGEPGVQGPPGVPGSVG
PKGSSGSPGPRGVPGPIGPQGLRGEVGLPGIKGDKGPLGSPGPKGDQGEKGPRGLTGEPG
LRGLPGAVGEPGAKGAVGPAGPDGHQGPRGEQGLMGMPGTRGPQGPSGDPGKPGLTGPQG
PQGLPGTPGRPGAKGEPGAPGRIVTSEGSSTITVPGPPGPPGAMGPPGPPGAPGPVGPAG
LPGQQEGLDLRGPPGPPGPPGPPGPSIPGPPGPRGPAGEGLPGPPGPPGSLLTNSETFFS
GPPGPPGPPGPKGDQGPPGPRGHQGEQGLPGFSTSGSSSLGLNLQGPPGPRGPKGDKGDP
GVPGAPGIPGGLSPGGSSSSTMFMPGPPGPPGPPGPPGSISSSGREIQQYISEYMQSDSI
RAYLSGVQGPPGPPGPPGPVTTIAGETFDYSELASRVGSYLQTSGYSISSSTSISSEDIV
AVLKRDDVRQYLRQYLVGDWSLQSLDYAELSSRVLSYMSSSGISIGLPGPPGPPGLPGTS
YEELLSLLQGSEYRGIIGPPGPPGPPGIPGNVWSSISVEDLSSYLHTAGVSSIPGPPGPP
GPPGPRGPPGVSGALATYAAENSDSFRSELISYLTSPDVRSFIVGPPGPPGPQGPPGDSR
LVSMDGSYSRGSRSSSHSASASRSSSYSSSMGIGGSSGGSLGEGGAFGLDMGLDRGYGGA
AEGGMYGGEGGLFGAGFAGGLDYNELAVRVSESLQRQGLLQGMAYTVQGPPGQPGPQGPP
GISKVFSAYSNVTEDLMDFFRTYGAIPGPPGQKGEVGTQGPKGERGPAGPPGRPGPPGPR
GHKGEKGDKGDQVYVGRRKRSIAIKP
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaaccaagaaaaacaagcgagatggcactgaagtcactgaaagaattatcacg
gaaacagtaactacaagacttacatccttacctccaaaagggggaaccagcaacggctat
gctaaaacgggctctctgggtggagggagccggctggagaagcacagcctgacccatggc
agcagtggctacataaactcaagtgggagcacgcgaggtaatgcctccacgtccagttac
aggagggctcactcccccgcctccactctgcccaactcacctggctccaccttcgaaagg
aaaacgcacatcactcggcatggaacatatgaagggagctccagtggcaactcctcccca
gagtaccctcggaaggaactcgcatcttcttcaaccagaggaaggagccagacacgagag
agcgaaatccgagttcgactgcagagcgcgtccccatctacccgatggacagaattggat
gatgttaagcgtttgctcaaggggagccgatcagcaagcgtgagccccacccggaactcc
tccaacaccctcccgatccccaagaaaggcacagtggagaccaaaatggtgaccgcgagc
tcccagtcggtgtccggcacctatgatgccaccatcttggatgccaaccttccctcccac
atgtggtcttccaccttgccggcgggttcctccatggggacctaccacaacaacgtgaca
acccagagctcgtccctcctcaacaccaacgcctattctgcgggatctgtcttcggagtt
ccaaataacatggcgtcctgctctcccacgctgcaccccggggtcagctcctgctcctca
gtgtttggcatgcagaacaacctggcacccagctcatccgccctgtcccacggcacggcc
accacctccacagcgtacggtgtgaagaagaacctgccccagagccctggcgttgtgagc
actggtgtgtccacctctgccgcctgcaccacaaatgtccagagtgatgatgtcctgcac
aaggactgtaaattcctgattctggagaaagacaacacaccagccaagaaggagatggag
ctgcttatcatgaccaaggacagcgggaaggtcttcactgcctccccagccagcatcgct
gcaacatcttttgcagatgataccctcaagaaagagaagcaagctgcctacacggctgac
acctgcctggtatcagaagctaatggagacgtgaagactgtgtccaccaagggcaaggcc
gcctctgcagaaatgcacaactacaaccaccgcgggggcggtgggggcggcgggggcggc
gggggtctgtggggggcggcgcccgcctggtgcccctgcggctcctgctgcagctggtgg
aagtggctgctgggcctgctgctcacctggctgctgctcctggggctgctcttcggcctc
atcgctctggctgaggaggtgcgggctttgaaggcgcgggtggccgcgctggagcagggc
cggggcgacgtcctgctctacgaccagaagatggatcgcgccagtaaggaccggctgctg
ggcaccgcccctggcgtgggagcagatgccgggggcctggggcttgatcaccacagtcag
gaggtgctctggctgtttgtgagggacaagctgaaggccgagcaggaaagcggaaatctc
cgaggaagccccggcccgaaaggtgacatgggaagtcaaggccctaaaggcgaccgaggg
ctccctgggactccaggcctccctgggctcctgggccacccgggtccagaaggaccaaag
ggacaaaaaggcagtgtgggagagccaggcatggagggacccatgggccagagagggcga
gaaggccccatgggacctcgtggtgaaccagggcctcctgggtttggagagaaaggtgac
agaggggctgctggtgaacctggtgttcagggcccacccggagtcccaggttctgtgggt
cccaaaggttccagcggttctcctggcccacggggtgtcccaggcccaataggtccccaa
gggctccgaggggaagttggacttcctggtatcaaaggtgacaaaggacctctggggtca
ccaggacccaaaggtgaccagggggagaaaggaccccgaggcctcacaggtgagccgggc
ttgagaggcctgcctggtgctgtcggtgagcccggagccaaaggagcagtcggacccgct
ggccccgatggacaccaaggtccaagaggtgaacaaggtctgatggggatgcctggaacc
cgaggaccacaagggccttctggagacccaggaaagccaggtctcactggaccccaagga
cctcagggacttcctggtacccctggccgaccaggagctaaaggtgaacctggagctcca
ggcaggatcgtgacctcagaggggtcatcgacgatcactgtcccaggcccgccggggcct
cctggagccatgggaccaccaggacctccaggtgccccaggtcctgtgggcccagctggt
ctccctggacagcaagaaggtcttgatttacgaggtcccccaggcccacctggaccacct
gggcctccaggaccttccattccaggcccgccaggaccccgaggcccagcaggagaaggc
ctgccaggcccaccaggcccaccgggatctctcctgaccaattcagagaccttcttctca
gggccccccggccccccaggaccccccggccccaagggagaccaaggccccccaggcccc
cgaggacaccaaggcgagcaaggcctccccgggttctccacctccggttccagttccctt
ggactcaacctgcagggaccacccggcccccggggacccaagggggacaaaggtgatcct
ggggtcccaggggctcctggcattcctggtggtctctctccagggggatcgtcgtcaagc
acaatgttcatgccagggcccccaggccccccaggccccccaggccccccaggctccatc
agcagctctggccgggagatccagcagtacatctctgagtacatgcagagcgacagcatt
cgggcctatctctctggagttcagggtccccctggaccacccggtcccccagggcctgtc
accaccattgcgggggagactttcgactactcagagctggcaagccgtgtcgggagctac
ttgcagacctcagggtacagcatcagctcctccacctccatctcttctgaggacatcgtg
gctgtgctgaaacgggatgacgtgaggcagtatctgcgtcagtatctggttggagattgg
tccctccagtctttggactacgccgagctgagcagtcgcgttctcagctacatgtccagc
tctggaatcagcattgggcttcctggccccccgggaccccctggcttgccaggaacatcc
tatgaagagctcctctccttgcttcaagggtctgaatacagaggcatcattgggccccct
ggcccccctgggcccccagggatcccaggcaacgtgtggtccagcatcagcgtggaggac
ctctcttcttacctgcacactgctggtgtgtcctccatccctggccctccaggccctcct
ggtcctccgggtcctcgagggcctccaggggtctcgggagctctggcaacctacgcggcc
gaaaacagtgacagcttccggagtgaactgatcagctacctcacgagcccggatgtgcgg
agcttcatcgtgggcccaccgggccctccaggaccccaggggccgcctggggacagccgt
ctcgtgtccatggatggctcctacagccggggcagcaggtcctcctctcacagcgcgtcg
gccagtcggagctcctcctacagctcctccatgggcataggaggatccagtggaggctcc
cttggtgaagggggggcctttggcctggacatgggcctggaccgaggctatgggggagca
gcagaaggtggcatgtacggcggtgaaggtggactgttcggagctggctttgccggaggt
ctggactacaacgagctggctgtccgggtatctgagagcttgcaacgtcagggcctgctg
caggggatggcctacactgtccagggcccgccgggccagccagggccccagggccccccc
ggcatcagcaaggtcttctctgcctacagcaatgtgaccgaggacctcatggactttttc
cgaacttatggagccattccaggcccccctgggcagaaaggagaggtgggcacccaagga
cccaaaggtgagcggggccccgcaggaccaccaggtcggcctgggccacccgggcctcga
gggcacaagggagaaaaaggagacaaaggtgaccaagtctatgtggggcggaggaagaga
agcatcgccatcaagccgtga
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