Enhydra lutris kenyoni (northern sea otter): 111146465
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Entry
111146465 CDS
T05871
Name
(RefSeq) polyadenylate-binding protein 1
KO
K13126
polyadenylate-binding protein
Organism
elk
Enhydra lutris kenyoni (northern sea otter)
Pathway
elk03015
mRNA surveillance pathway
elk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
elk00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111146465
09123 Folding, sorting and degradation
03018 RNA degradation
111146465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elk03019
]
111146465
03041 Spliceosome [BR:
elk03041
]
111146465
Messenger RNA biogenesis [BR:
elk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
111146465
mRNA cycle factors
Stress granule specific factors
111146465
Spliceosome [BR:
elk03041
]
Complex C
Other components
Complex C specific factors
111146465
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_7
RRM_5
RRM_10
RBD_RDR6
RRM_occluded
RRM_3
YflT
Motif
Other DBs
NCBI-GeneID:
111146465
NCBI-ProteinID:
XP_022357724
UniProt:
A0A2Y9JDH4
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFER
HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKN
LDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT
KPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAAIPQTQNRA
AYYPPSQIAQLRPSPRWTAQGARPHPFQNMPGAIRPAAPRPPFSTMRPASSQVPRVMSTQ
RVANTSTQTMGPRPAAAAAAATPAVRTVPQYKYAAGVRNPQQHLNAQPQVTMQQPAVHVQ
GQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESP
ESLRSKVDEAVAVLQAHQAKEAAQKAVNSATGVPAV
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccagcgcccccagctaccccatggcctcgctctacgtgggggacctacacccc
gacgtgaccgaggcgatgctctacgagaagttcagcccggccgggcccatcctctccatc
cgggtctgcagggacatgatcacccgccgctccttgggctacgcgtatgtgaacttccaa
caaccggcggacgcggagcgtgctttggacaccatgaattttgatgttataaagggcaag
ccagtacgcatcatgtggtctcagcgtgatccatcacttcgcaaaagtggagtgggcaac
atattcattaaaaatttggacaaatccattgataataaagcactgtatgatacattttct
gcttttggtaacatcctttcatgtaaggtggtttgtgatgaaaatggctccaaaggttat
ggatttgtacattttgagacacaggaagcagctgaaagagctattgaaaaaatgaatggg
atgctactaaatgatcgcaaagtatttgttggacgatttaagtctcgtaaagaacgagaa
gcagaactcggagctagggcaaaagagttcaccaatgtttacatcaagaattttggagaa
gatatggatgatgagcgccttaaggatctctttggcaagtttggacctgccttaagtgtg
aaagtaatgactgatgaaagtggaaaatccaaaggttttggatttgtaagcttcgaaagg
catgaagatgcacagaaagctgtggatgagatgaatggaaaggagctcaatggaaaacaa
atttacgttggtcgagctcagaaaaaagtggaacggcagacggaacttaagcgcaaattt
gaacagatgaagcaagataggatcaccagataccagggtgttaacctttatgtgaaaaat
cttgatgatggtattgatgacgaacgtctccggaaagagttttctccttttggtacaatc
actagtgcaaaggttatgatggagggtggtcgcagcaaagggtttggttttgtatgtttc
tcctccccagaagaagccacaaaagcagttacagaaatgaatggtagaattgtggccacc
aagccattgtatgtagctttagctcagcgcaaagaagagcgccaggctcacctcactaac
cagtatatgcagagaatggcaagtgtaagagctgtgcccaatcctgtaatcaacccctac
cagccagcacctccttcaggttacttcatggcagctatcccacagactcagaaccgtgct
gcatactatcctcctagccaaattgctcaactaagaccaagtcctcgctggactgctcag
ggtgccagacctcatccattccaaaatatgcccggtgctatccgcccagccgcccctaga
ccaccatttagtactatgagaccagcttcttcacaggttccgcgagtcatgtcaacacag
cgtgttgctaacacatcaacacagacaatgggtccacgtcccgcagctgccgctgccgca
gctactcctgctgtccgcaccgttccgcagtataagtacgctgcaggagtccgcaatcct
cagcaacatcttaatgcacagccacaagttaccatgcagcagcctgctgttcatgtacaa
ggtcaggagcctttgactgcttccatgttggcatctgcccctcctcaagagcaaaagcaa
atgttgggtgaacggctctttcctctaattcaagccatgcaccctactcttgctggtaaa
atcactggcatgttgttggagattgataattcagaacttcttcatatgcttgagtctccg
gagtctctccgttctaaagttgatgaagctgtagctgtactacaagcccaccaagctaaa
gaggctgcccagaaagcagtgaacagcgccactggcgttccggctgtttaa
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