Enhydra lutris kenyoni (northern sea otter): 111147884
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Entry
111147884 CDS
T05871
Name
(RefSeq) ATP-dependent RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
elk
Enhydra lutris kenyoni (northern sea otter)
Pathway
elk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
elk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111147884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elk03019
]
111147884
03012 Translation factors [BR:
elk03012
]
111147884
Enzymes [BR:
elk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111147884
Messenger RNA biogenesis [BR:
elk03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
111147884
Translation factors [BR:
elk03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
111147884
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
PhoH
AAA_14
ATPase
NPHP3_N
DUF6782
RsgA_GTPase
AAA_23
AAA_34
NACHT
Motif
Other DBs
NCBI-GeneID:
111147884
NCBI-ProteinID:
XP_022359859
UniProt:
A0A2Y9JJU0
LinkDB
All DBs
Position
Unknown
AA seq
1016 aa
AA seq
DB search
MSYDYHQNWGRDGGPRNSGGGYGGSYGAGHGGGHGGNRGSGGGGGGGGGGGGGGGRGGRG
RHPGHLKGREIGLWYAKKQGQKNKEAERQERAVVHMDERREEQIVQLLHSVQAKNGKDSE
AQISWFAPEDHGYGTESPTENKPNSEKKLENQEKKLISQEKRAFRIRDKYIDRDSEYLLQ
ENEPDVTLDQQLLEDLQKKKSDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGET
GCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGY
QIRLQSRLPRKQGSILYCTTGIILQWLQSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKD
LLSFRPDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPEQK
EHRSQFKRGFMQGHVNRQEKEEKEAIYKERWPDYVRELRKRYSASTVDVLEMMDDDKVDL
NLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVN
QTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVS
KANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIA
YFLSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALF
CCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTKSDHLTVVNAFEGWEEARRR
GFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKSNINSDNEKIIK
AVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTEFHYNWLIYHLKM
RTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKE
LDILLQEKIESPHPVDWKDTKSRDCAVLSAIIDLIKTQEKASPRNLPPRFQDGYYS
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgattaccatcagaactggggccgggatggtggaccccgcaactccggcggg
ggctatggaggaagttatggggcgggccatggaggaggccatggagggaaccgaggctcc
ggaggcggcggcggcggcggcggcggcggaggaggaggtggtggtcgaggcggacgaggc
cgacatcctgggcacctgaaaggccgcgaaatcggcttgtggtatgcaaagaaacaggga
cagaagaacaaggaggcggagaggcaggagagagctgtagtacacatggatgaacggcga
gaagaacagattgtgcagctgctgcattcagtccaggcaaagaatggtaaagactcagaa
gcacagatctcctggtttgctcctgaagatcacggatatggtactgaatctcctactgag
aacaaacccaactcagagaagaaacttgaaaaccaggaaaagaaattgataagtcaagaa
aagagagcatttagaatcagggacaaatatattgaccgagattctgaatatctcttgcaa
gaaaatgaaccagatgtaactttagaccaacaactgttggaagatttacaaaagaaaaaa
agtgacctccggtatatcgaaatgcagcatttcagggaaaagctgccttcatatggaatg
caaaaggaattggtaaatatgattgataaccatcaagtaacagtaataagtggtgaaact
ggatgtggaaaaactactcaagttactcagttcattttggataactacattgaaagaggg
aaaggatctgcatgcaggatagtttgtacacagccaagaagaattagtgccatttcagtc
gcagagagagtggctgcagaaagggcagaatcttgtggcaatggtaacagtactggatac
cagattcgtctccagagtcggttgccaaggaaacagggttctatcttatactgcacaaca
ggaatcatcctgcagtggctccagtcagactcgcatttgtccagcgttagtcatattgtg
cttgatgaaatccatgagagaaatctacagtcagatgttttaatgacggttattaaagat
cttctcagttttcgacctgacctgaaagtgatattgatgagtgcgactttaaatgccgag
aaattttcagaatatttcggtaactgtccaatgatacacatacctggttttactttcccg
gttgtggagtatcttttggaagatataattgaaaaaataagatacgttccagaacaaaaa
gaacacaggtctcagtttaagaggggtttcatgcaagggcatgtaaatagacaggaaaaa
gaagaaaaagaagcaatctataaagaacgctggccagattatgtaagggaactgcgaaaa
aggtattctgcaagtaccgtagatgttctggaaatgatggatgatgataaagttgatctg
aatttgattgctgccctcattcgacacattgttttagaagaagaggatggtgcaatattg
gtctttctaccaggctgggacaatatcagcactttacatgatctcttgatgtcacaagtg
atgtttaaatcagacaggtttcttattatacccctacattcactgatgcctacagttaac
cagacacaggtatttaaaagaacccctcctggtgttcggaaaatagtaattgctaccaat
attgcagagactagcattaccatagatgatgtcgtttatgtgatagatggaggaaaaata
aaagaaacacactttgacacacaaaacaacatcagtacaatgtctgctgagtgggttagt
aaagctaatgccaaacaaaggaaaggtcgagctggaagagttcaacctggtcattgctat
catctgtataatggtcttagagcaagccttctggatgactatcagctaccagaaattttg
agaactcctttggaagaactttgtttacaaataaagattttaaggctaggtggaattgct
tattttctgagtaggttaatggatccaccatcagacgaagcagtgtcactctccataaaa
cacctgatggaactgaacgctttggataaacaagaagaattgacaccccttggagtccac
ttagcacgattaccagttgagccacacatcgggaagatgattctttttggagctctgttc
tgttgtttagatccagtacttaccattgctgctagtctcagcttcaaagatccctttgtc
attccattgggcaaagaaaagattgcagatgcaagaagaaaagaattggcaaaagatact
aaaagtgaccacctgacagttgtaaatgcatttgagggctgggaagaagctaggcgacgt
ggtttcagatatgaaaaagactactgctgggaatattttttgtcttcaaacacattgcag
atgctgcataacatgaaaggacagtttgctgagcatcttcttggagcgggatttgtaagc
agtagaaatcctaaagatccaaaatctaatataaattcagataatgagaagataattaaa
gctgtcatctgtgctggtttatatcccaaagttgctaaaatccgactaaatttgggtaaa
aaaaggaaaatggtcaaagtttacacaaaaactgatggactagttgctattcatcctaaa
tctgttaatgtggagcaaacagaatttcactacaactggcttatctatcatctgaagatg
agaacaagtagtatttacttatatgactgtacagaagtttccccatactgtctcttattc
tttggaggtgatatttccatccagaaggataatgatcaggaaactattgctgtagatgaa
tggattgtctttcagtctccagcaagaattgcccatcttgttaaggaattaagaaaggag
ctagatatccttctgcaagagaagatcgaaagtcctcatcctgtagattggaaagatact
aaatccagagactgtgctgtcctgtcagctatcatagacttgatcaaaacacaggaaaaa
gcaagtcccagaaacttaccgccacgattccaggatggatattacagctga
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