KEGG   Enhydra lutris kenyoni (northern sea otter): 111148106
Entry
111148106         CDS       T05871                                 
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
  KO
K08737  DNA mismatch repair protein MSH6
Organism
elk  Enhydra lutris kenyoni (northern sea otter)
Pathway
elk01524  Platinum drug resistance
elk03430  Mismatch repair
elk05200  Pathways in cancer
elk05210  Colorectal cancer
Brite
KEGG Orthology (KO) [BR:elk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    111148106
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    111148106
  09162 Cancer: specific types
   05210 Colorectal cancer
    111148106
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    111148106
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:elk03400]
    111148106
DNA repair and recombination proteins [BR:elk03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     111148106
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II HORMA MUM1-like_PWWP WPP
Other DBs
NCBI-GeneID: 111148106
NCBI-ProteinID: XP_022360221
UniProt: A0A2Y9JI18
LinkDB
Position
Unknown
AA seq 1360 aa
MSRQSTLYSFFPKSPALNNANKSSVRASGESGGAAAATGASRSPGGDVAWSEAGPGPLAG
SASPPEARNVNGGLRRPTAPAVPASSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFIR
EKGKSVRVHVQFFDDSPTRGWVSRRLLKPYTGSKSKEVQKGGHFYSSKPEILRAMQRADE
ALNKDKIERLELAVCDEPSEPEEEEEMEVGATYSSDKSEEDDHEIESEEEVRPKVQGSRR
SSRQIKKRRVISDSESDIGGSDVEFKPDAKEEGSSDEISSGVVDSDSEGLDSPVKVASKR
KKMVTGNGSLKRKSSRKEMPLATKRSTGISSETKSALNAFSAPQNSESQAHVSGGCDDNS
RPTIWYHETLEWLKEDKRRDLQRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQN
FDLVIFYKVGKFYELYHMDALIGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKV
ARVEQTETPEMMEARCRKMAHISKYDRVVRREICRVITKGTQTYSVLEGDPSENYSKYLL
SLKEKEEDSSGHTRVYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGN
LSTETKMILKGSLSSSLQEGLIPGSQFWDAAKTLRTLLEEGYFKEKLNEDSGVVLPKVLK
GMTSESDSLGLTPGDKSELALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDMVSAT
RPGAVFAKGNQRMVLDAVTLSNLEIFMNGTNGSTEGTLLEKIDSCHTPFGKRLLKQWLCA
PLCSPYAINDRLDAIEDLMAVPDKISDVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPDS
RAIMYEETTYSKKKIIDFLSALEGFKVICKIIEIMEEIVDNFKSKILKQVITLQTKTPQG
RFPDLTIELNRWDTAFDHEKARKTGLITPKTGFDSDYDQALADIRENEQSLLEYLEKQRS
RIGCRTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLANLIN
AEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRPVIL
LPEEGTPPFLDLRGSRHPCITKTFFGDDFIPNDILIGCEEEEENGKAYCVLVTGPNMGGK
STLMRQAGLLAVMAQTGCYIPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASI
LTHATAHSLVLVDELGRGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYSQNV
AVRLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKA
REFEKMTQSLRLFREVCLASERSTLDAEAVPKLLTLIKEF
NT seq 4083 nt   +upstreamnt  +downstreamnt
atgtcgcgacagagcacgctgtacagcttcttccccaagtcgccagcgctgaataatgct
aataagtcctcggtcagggcctcaggcgaaagcggcggcgctgccgccgccaccggggcc
tcccgttctcccggcggggatgtggcctggagcgaggccgggcctgggcccttggcaggc
tccgcgtcgccgccggaggcgaggaacgtcaatggagggctgcgaagacctaccgcccct
gcggtccccgccagttcttgtgacttctcaccaggtgatttggtttgggccaagatggag
ggttacccctggtggccttgcctggtatacaaccacccttttgatggaacattcatccgt
gagaaaggaaagtccgtccgagttcatgtacagttttttgatgacagcccaacaaggggc
tgggttagcagaaggctattaaagccatatacaggttcaaaatcgaaggaagtgcaaaaa
ggaggtcatttttacagttcaaagcctgaaatactcagagcaatgcaacgtgcagatgaa
gccttgaataaagacaagattgagaggcttgaattagcagtgtgtgatgaaccctcagaa
ccagaggaagaagaagagatggaggttggtgcaacttactcatcagataagagtgaagaa
gatgatcatgaaattgaaagtgaagaggaagtacggcccaaggtccaaggatctaggcga
agcagccgccaaataaagaaaagaagggtcatatcagactctgagagtgacattggtggt
tctgatgtggaattcaagccagatgccaaggaggaaggaagtagtgatgaaataagcagt
ggagtggtggacagtgacagtgaaggcctggacagtcctgtcaaagtggcttcaaagcgg
aagaaaatggtgactggaaatggctctctcaaaaggaaaagttcaaggaaggaaatgccc
ttggccaccaaacgatcaactggcatttcatcagaaaccaagagtgctttaaatgctttc
tctgcccctcaaaattctgaatctcaagcccacgttagtggaggatgtgatgataatagt
cgccccactatctggtatcatgaaaccctagagtggcttaaggaggacaagagaagagat
ctacagaggaggcgacctgatcaccctgattttgatgcatccacactctacgttcctgag
gatttccttaattcctgtactcctgggatgaggaagtggtggcagattaagtctcagaac
tttgatcttgttatattttataaggtgggcaaattttatgaactataccacatggatgct
cttattggagtcaacgaactaggtctggtgttcatgaaaggcaactgggctcattctggt
ttccctgaaattgcctttggccgatattctgattctctggttcaaaagggctataaagta
gcacgagtggaacagacagagaccccggagatgatggaggcacgatgccgtaagatggca
catatatctaagtatgacagagtggtgaggagggagatctgtagagtcattactaagggt
acacagacctacagtgtattggaaggtgatccctctgagaactacagtaagtatcttctt
agcctcaaagaaaaagaagaggattcttctggccacactcgggtgtatggagtatgcttt
gttgatacctcactgggaaagtttttcataggtcagttttcagatgatcgccattgttcc
agatttaggactctagtggcacactatcctccagtacaagtcttgtttgagaagggaaat
ctctcaacagaaactaagatgattctaaagggttcattatcctcctcacttcaggaaggt
ctcataccaggctcccaattttgggacgcagccaaaacattgagaacgctccttgaagaa
ggatattttaaggaaaagttaaatgaggacagtggggtagtgttacccaaggtgcttaaa
ggtatgacctcagagtctgattctcttgggttgacaccaggagacaagagtgaattggcc
ctctctgctctaggtggttgtgtcttctacctcaaaaaatgccttattgatcaagagctt
ttatcaatggcaaattttgaagaatacattcccttggattctgacatggtcagtgctaca
agacctggtgctgtttttgctaaaggcaatcagcgaatggtgctagatgctgtgacatta
agcaacttggagattttcatgaatggaacaaatggttctactgaagggaccctactagaa
aagattgatagttgccatactccctttggtaagcggcttctaaagcagtggctttgtgcc
ccactctgtagcccttatgctatcaacgatcgtctagatgctatagaagacctcatggct
gtgcctgacaaaatctctgatgtggtagaccttctgaagaagcttccagaccttgaaagg
ctactgagtaaaattcataatgttgggtctcccctgaagagccagaaccacccagatagc
agggctatcatgtatgaagaaactacatacagcaaaaaaaagattattgattttctttct
gctctagaaggattcaaagtaatatgtaaaattatagagattatggaagaaatcgttgac
aactttaagtctaaaatccttaagcaggtcattactctacaaacaaaaactcctcagggc
cgtttcccagatttgactatagaactgaaccgatgggatacagcctttgaccatgagaag
gctagaaagactggactaattactcccaaaacaggatttgactctgattatgaccaagct
cttgctgacataagagaaaatgaacagagcctcctggaatatttggagaaacagcgcagt
cgaattggctgtaggaccattgtctactgggggattggtaggaaccgttaccagctggaa
attccagagaatttcatcactcgtaatttgccagaagagtatgagttgaaatctaccaag
aagggctgtaagcgatactggaccaaaactattgagaagaagttggctaatctgataaat
gctgaagaacggagagacgtatccttgaaggactgcatgcggcgactgttctataacttt
gataaaaattataaggactggcagtccgctgttgagtgcatcgcagtattggatgtctta
ctgtgcctggctaactacagtcgagggggtgatggccctatgtgtcgtccagtaattctg
ttgccagaagaaggcactcctcctttcttagaccttagaggatcacgtcatccctgcatc
acgaagactttttttggagatgactttatacctaatgacattctaataggctgtgaggaa
gaggaggaaaatggcaaagcttattgtgtgcttgttactggacctaatatggggggcaag
tctacgctcatgagacaggctggcctattagctgtaatggcccaaacgggttgttacata
cctgctgaagtatgtaggctcacaccaattgatagagtatttactagacttggtgcctcc
gacagaataatgtcaggtgaaagtacgttctttgttgaattgagtgaaactgccagcata
cttacacatgcaacagcacattctctggtccttgtggatgaattggggagaggtactgca
acatttgatggaacagcaatagcaaatgcagttgttaaagaacttgctgagaacataaag
tgtcgtacattgttttctacccactaccattcattagtagaagattattctcaaaatgtt
gcagtgcgcctgggccacatggcatgcatggtagaaaatgaatgtgaggatcccagccag
gagactattactttcctctataaattcattaagggagcttgtcctaaaagctacggcttt
aatgcagcaaggcttgctaatcttccagaggaggttattcaaaagggacatagaaaagca
agagaatttgagaagatgactcaatcactgcgattatttcgggaagtttgcctggctagt
gaaaggtcgactctagatgctgaagctgtccctaaactgctgactttgattaaggaattc
tag

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