Enhydra lutris kenyoni (northern sea otter): 111148927
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Entry
111148927 CDS
T05871
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
elk
Enhydra lutris kenyoni (northern sea otter)
Pathway
elk03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
elk00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111148927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elk03019
]
111148927
Messenger RNA biogenesis [BR:
elk03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
111148927
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
111148927
NCBI-ProteinID:
XP_022361432
UniProt:
A0A2Y9JKD0
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MSAGEVERLVSELSGGTGGDEEEEWLYGGPWDVHVHSDLAKDLDENEVERPEEENASANP
PSGIEDETAENGVPKPKVTETEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNL
NIKTGGRVYGTTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGF
NEDTWKAYCEKQKRIRMGLEVIPVTSTTNKITAEDCTMEVTPGAEIQDGRFNLFKVQQGR
TGNSEKEAALPSTKAEFTSPPSLFKTGLPPSRNSTSSQSQTSTASRKANSSVGKWQDRYG
RAESPDLRRLPGAIDVIGQTITISRVEGRRRANENSNIQVLSERSATEVDNNFSKPPPFF
PPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGAPPPSLIPTIESG
HSSGYDSRSARAFPYGNVAFPHLPGSAPSWPSLVDTSKQWDYYSRREKDRDRDRDRDRER
DRDRDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRER
RHREKEETRHKSSRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKEAGSEPAPEQESTEAA
PAE
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggcgaggtcgagcgcctagtgtcggagctgagcggcgggaccggaggggat
gaggaggaagagtggctctatggcggcccatgggacgtgcatgtgcacagtgatttggca
aaggacctagatgaaaatgaagttgaaaggccagaagaagaaaatgccagtgctaatcct
ccatctggaattgaagacgaaactgctgaaaatggcgtgcctaaaccgaaagtgaccgag
actgaagatgatagtgatagtgacagtgatgatgatgaggatgatgttcatgtcaccata
ggagacattaaaacaggagcaccacagtatgggagttacggtacagcacctgtaaatctt
aacattaaaacagggggaagagtttatggaactacaggaacaaaagtcaaaggggtagac
cttgatgcacctggaagcattaatggagttccactcttggaggtagatttggattccttt
gaagataaaccatggcgtaaaccgggtgctgatctttctgattattttaattatgggttt
aatgaagatacttggaaagcttactgtgaaaaacaaaagaggatacgaatgggacttgaa
gttataccagttacctctactacaaataaaattacggccgaagactgtactatggaagtt
acaccaggtgcagagatccaagatggcagattcaatctttttaaggtacagcagggaaga
actggaaattcagagaaggaagcagcacttccatctacaaaagctgagtttacttctcct
ccttctttgttcaagactggactcccaccaagcagaaacagcacctcttctcagtctcag
acaagtactgcctccagaaaagccaattccagcgttggaaagtggcaggaccggtatggg
agggccgaatcacctgacctaaggagattacctggggcaattgatgttattggtcagact
ataacaattagccgagttgaaggaaggcgacgggcaaatgaaaacagcaacatacaggtc
ctttctgaaagatctgctactgaagtagacaacaattttagcaaaccacctccatttttc
cccccaggagctcctcccacccaccttccacctcctccatttcttccacctcctccaact
gtcagcactgctccacctctgattccaccaccaggtattccaataactgtaccacctcca
ggttttcctcctccaccaggcgctccacctccatctcttataccaacaatagaaagtgga
cattcctctggttatgatagtcgttctgcacgtgcttttccatatggcaatgttgccttt
ccccaccttcctggttctgctccttcatggcctagtcttgtggataccagcaagcagtgg
gactattattcaagaagagagaaagatcgagatagagaccgagacagagaccgggaacga
gaccgtgatcgggacagagaaagagaacgcaccagagagagagagcgggagcgtgatcac
agtcctacaccaagcgtttttaacagtgacgaagaacgatacagatacagagaatatgca
gaaagaggctacgagcgccacagagcaagtcgagagaaagaagaacgacacagagaaaga
cgacacagagagaaagaggaaaccagacacaagtcatctcgaagtaacagtagacgtcgc
catgaaagtgaagaaggagacagtcacaggagacacaagcacaaaaaatctaagagaagc
aaagaaggaaaagaagctggcagtgagcccgcccctgaacaggagagcaccgaagccgca
ccagccgaatag
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