Enhydra lutris kenyoni (northern sea otter): 111149144
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Entry
111149144 CDS
T05871
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
elk
Enhydra lutris kenyoni (northern sea otter)
Pathway
elk03030
DNA replication
elk03410
Base excision repair
elk03420
Nucleotide excision repair
elk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
elk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111149144
03410 Base excision repair
111149144
03420 Nucleotide excision repair
111149144
03430 Mismatch repair
111149144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
elk03032
]
111149144
03400 DNA repair and recombination proteins [BR:
elk03400
]
111149144
DNA replication proteins [BR:
elk03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
111149144
DNA repair and recombination proteins [BR:
elk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
111149144
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
BRCT_2
Rad17
RuvB_N
AAA_17
AAA_30
AAA_14
AAA_5
AAA_33
AAA_16
Zeta_toxin
AAA_7
nSTAND3
AAA_18
AAA_19
SKI
RNA_helicase
NTPase_1
NPHP3_N
Nexin_C
TIP49
AAA_28
Motif
Other DBs
NCBI-GeneID:
111149144
NCBI-ProteinID:
XP_022361797
UniProt:
A0A2Y9JLG9
LinkDB
All DBs
Position
Unknown
AA seq
1155 aa
AA seq
DB search
MDIRKFFGVIPSGKKPVTETVKKNEKTKSAEETLKAKKGIKEIKVNSSCKEDDSKQKQPN
KKKRIIYDSDSESEETVQVKNAKKQPEKLPLSSKPGKILRQDPVTYISETDEEDDFMCKK
AASKSKENGGSTNSYLGASNMKKNEENTKTKNKPLSPIKLTRTSVLDYFGTGSVQRSDKK
MVASKRKEPSQNADDSRLNDEAIAKQMQLDEDAELERQLHEDEEFARTLAMLDEEPKTKK
AQKDPGEREAFSSVQANLSKAGKHKSPHKVKTEQFSDDRKNCSPKKQSKCESLIGSQQHL
KSSPHKIGETSPKASSKVALLKKRGESSYKETEPMASKRKENAVELKGQTKTPKKPKSSP
AKKESISPEDSEKRRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLESI
ERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTNIIDEDGLLNLIRT
MPGKKSKYEIAVEAEMKKEKSKLERTPQKKDQGKRKISPTKKESESKKSRLTPKKDSTTK
SPKKGTGVFWRCLDFEEQVAEETDSDIQPRNLADDSSEKNKVEHLLWVDKYKPTSLKTII
GQQGDQSCANKLLRWLQNWHRSPSEDTKRAAKFGKFAGKDDGSSFKAALLSGPPGVGKTT
TASLVCQELGYSYVELNASDTRSKNSLKEIVAESLNNTSITGFYSTSQHGSGGTAHSVST
KHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQ
RPRVEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQA
KADSHRAKKDIRLGPFDVARKVFAAGEETAHMSLMDKSDLFFHDYSIAPLFVQENYVHVK
PVAAGGDMKKHLMLLSRAADSICDGDLVDRQIRSKQNWSLLPTQAIYASVLPGELMRGYM
TQFPTFPSWLGRHSSTGKHDRIVQDLALHMSLRTYSSKRTVNMDYLSHIRGALVQPLISQ
GVEGVQDVIALMDAYYLMKEDFENIMEMSSWGGKPSPFSKLDPKVKAAFTRTYNKEVHLT
PYSLQAVKTPRHSTGPALDSEYSEELNEDDSQSDEKDQDSMETDAMIKKKTKSSKPSKSE
KDKESRKGKGKSSKK
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggatattcggaaattctttggggttataccaagtggaaagaaacctgtaactgaaaca
gtaaagaagaatgagaaaacaaagtctgctgaagaaactttaaaagcaaagaagggaata
aaggaaatcaaggtaaatagttcttgtaaagaagatgactctaagcagaagcaaccaaac
aagaaaaagaggatcatctatgattcagattcagaatcagaggagacagtgcaggtaaaa
aatgccaaaaagcaaccagaaaaattgccattgtcttctaaacctggtaaaattctacgc
caggatcctgttacatacatttcagaaacagatgaagaagatgattttatgtgtaagaaa
gcagcctctaaatcgaaagagaatggaggatctacaaatagttatcttggagcatcaaac
atgaaaaagaatgaagaaaacactaaaaccaagaataaacctttatcaccaataaaactt
acccgcacgtcagtgcttgattattttggaactggaagtgtccaaagatcagataagaag
atggtagcaagcaaaagaaaagagccttcacaaaacgcagatgattccagattaaatgat
gaagccatcgccaagcaaatgcaacttgatgaggatgcagagctggagagacagctgcat
gaagatgaagagtttgccagaactttagccatgttggacgaagaacccaagaccaaaaag
gctcagaaggacccaggagagagagaagcattttcatctgtccaagccaatttaagtaaa
gcaggaaaacataaatctcctcataaagtaaaaacagaacaattttcagatgacagaaag
aactgcagtcccaagaagcaatctaaatgtgaaagtttgataggatctcagcaacatttg
aagtcgtcccctcacaaaataggagaaacttctccaaaagccagttccaaggtggccctt
ttgaaaaaaaggggagagagttcttataaagaaacagagcctatggcttcaaaaagaaaa
gaaaatgctgttgaattaaaaggacagacaaaaactcctaagaaacccaaaagttctcca
gctaaaaaagagtctataagtcctgaagattctgagaagagacgcactaattatcaagct
tatcgaagctacttaaatcgagaaggtcccaaagctctgggctccaaagaaataccgaag
ggagctgaaaattgcttggaaggccttacatttgtaatcacaggagtgctggagtccatt
gaacgagatgaggccaagtctctaattgagcgttatgggggaaaagtaacaggaaatgtc
agcaagaaaacaaactaccttgtcatgggtcgtgatagtggacagtccaagagtgataag
gcagcagctttggggacaaatattattgatgaagatggcctgttgaatctgattcgaact
atgccaggcaagaagtctaagtatgaaatagcagttgaagctgagatgaagaaagaaaag
tccaaattggaaagaacacctcaaaaaaaagaccaaggaaaaagaaaaattagcccaact
aagaaggaatcagaatccaaaaaaagcagactgactcccaaaaaggacagcactacaaag
tcgccaaaaaagggaacaggtgtgttttggagatgcctggacttcgaggagcaggtggct
gaggagacggacagtgacatccagcctaggaatttggctgatgacagcagtgaaaaaaac
aaagtggaacatttgctctgggtggataaatacaagccaacctcgctcaagaccataatc
ggacagcaaggtgaccagagctgtgccaacaaactcctccgctggctccagaactggcac
aggagtccgtccgaggatacgaaacgcgcagcaaagttcggtaaatttgctggcaaagat
gatggctctagttttaaagcggcgctgctctcaggccctccaggtgttggcaagacaacc
acagcttctctggtttgtcaggaattgggatatagctacgtggaactgaatgcaagtgac
actcggagtaagaacagtttgaaggagattgttgctgaatcactgaataataccagcatc
acaggcttttattcaacttctcagcatgggtcaggcggaacagcccattcagtaagcacg
aaacatgctctcatcatggatgaagtagatggcatggcaggcaatgaggacaggggagga
attcaggaattaattggtctgataaaacatacaaaaattcccattatttgtatgtgcaat
gatagaaatcatcccaagattcgctctttggttcattattgttttgatcttcgttttcaa
agacctcgagttgaacagattaagggtgctatgatgtctattgcatttaaagagggtttg
aagatcccccctccagctatgaatgaaataattttgggagccaatcaagatatcagacag
gttttacacaatctgagtatgtggtgtgcgcgaagtaaggccctaacctatgaccaggcc
aaggctgattctcatagagccaagaaggatatcagactgggcccatttgatgttgcccgg
aaagtgtttgcagctggagaggagaccgctcatatgtcacttatggacaagtcagatctc
ttctttcatgattattcgatagcacccctctttgtccaggagaactacgtacacgtgaag
cctgtggctgcagggggagacatgaaaaagcacttgatgcttttaagcagagcagcagac
agcatatgtgatggtgacctagtggaccgccagatccggagtaaacagaactggagtctc
ctgcccacgcaggccatttatgccagtgttcttcctggagagttaatgagggggtacatg
actcagtttccaaccttcccaagctggttggggaggcactcatctaccggcaaacatgat
cgtattgtgcaggacctagcacttcacatgagtctcaggacttactccagcaaaaggact
gtaaacatggattacctgtcccatataaggggtgcacttgtacagcccttgatctcacaa
ggggtagaaggagtacaggatgtcattgctcttatggacgcctactacttgatgaaagaa
gactttgagaatatcatggaaatgagcagctggggaggcaaacctagtcccttctccaag
ctggatcccaaggtgaaagcagccttcacgagaacttacaataaggaagtccacctcact
ccatattcccttcaggctgtaaagacacccagacacagcacaggccccgcgctggattct
gaatacagtgaagagttaaatgaagatgactctcaatctgatgagaaagaccaagactct
atggaaactgatgcaatgatcaagaaaaagacaaaatcttcaaagccttcaaaatcagaa
aaagataaggagtccaggaaaggaaaaggaaaaagttcaaagaagtga
DBGET
integrated database retrieval system
