Enhydra lutris kenyoni (northern sea otter): 111149245
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Entry
111149245 CDS
T05871
Name
(RefSeq) LOW QUALITY PROTEIN: huntingtin
KO
K04533
huntingtin
Organism
elk
Enhydra lutris kenyoni (northern sea otter)
Pathway
elk05016
Huntington disease
elk05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
elk00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
111149245
05022 Pathways of neurodegeneration - multiple diseases
111149245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elk03019
]
111149245
04131 Membrane trafficking [BR:
elk04131
]
111149245
03029 Mitochondrial biogenesis [BR:
elk03029
]
111149245
Messenger RNA biogenesis [BR:
elk03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
111149245
Membrane trafficking [BR:
elk04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
111149245
Mitochondrial biogenesis [BR:
elk03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
111149245
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
111149245
NCBI-ProteinID:
XP_022361911
UniProt:
A0A2Y9JMT2
LinkDB
All DBs
Position
Unknown
AA seq
3130 aa
AA seq
DB search
MATLEKLMKAFESLKSFQQQQQQQQQPPPPPPQLPQPPPQAQPPPPQPQPPPPPPPPPPP
GPAVAEEPLHRPKKELSATKKDRVNHCLTICENIVAQSLRNSPEFQKLLGIAMELFLLCS
DDAESDVRMVADECLNRVIKALMDSSLPRLQLELYKEIKKNGAPRSLRAALWRFAELAHL
VRPQKCRPYLVNLLPCLTRISKRPEESVQETLAAAVPKIMASFGNFANDNEIKVLLKAFI
ANLKSSSPTIRRTAAGSAVSICQHSRRTQYFYSWLLNVLLGLLVPVESEHSTLLILGVLL
TLRYLVPLLQPQVKDTSLKGSFGVTRKELEVSPSTEQLIQVYELTLHYTQHQDHNAVTGA
LELLQQLLRTPPPELLRALSTPGGGPLSTMCHQPGCRSRSGSIVELLAGGGSSCSPVLSR
KQKGKVLFGEAAALEDDSESRSEGSSPAFTASVKGEIGGELAASSGVSTPGSASSAADSV
GHDIITEQPRSQHTLQPDSVDLTGCDLASAATDGDEEDILSHSSSQISAVPSDPAMDLND
GTQASSPVSDSSQTTTEGPDSAVTPSDSSEIVLDGADSQYSGMQIGQPPDEDEEATGVLP
DEDADAFRSSSLALQQAHLLRSMGHSRQASDSSIDKFVSKDEAAEPGDQENKPCRIKGDI
GQSTDDDSVPLVHCVRLLSASFLLTGEKNVLVPDRDVRVSVKALALSCVGAAVALHPESF
FSKLYKVPLDTMEHPEEQYVSDILNYIDHGDPQVRGATAVLCGTLISSILSRSRFQVGDW
MGTVRALTGNTFSLVDCIPLLQKTLKDESSVTCKLACTAVRHCVMSLCSSSHSELGLQLV
TDLLTLRDSSYWLVRTELLETLAEIDFRLVSFLEAKAENLHRGTHHYTGLLKLQERVLHD
VVIYLLGDEDPRVRHVAAAALIRLVPKLFYKCDQGQADPVVAVARDQSSVYLKLLMHETQ
PPSHFSVSTITRIYRGYNLLPTMTDVTVENNLSRVIAAVSRELVTSTTRALTFGCCEALC
LLSTAFPVCIWSLGWHCGVPPLSASDESRKSCTVGMATMILTLLSSAWFPLDLSAHQDAL
ILAGNLLAASAPKSLRSSWTSEEEASPAAAKQEEVWPALGDRTLVPMVEQLFSHLLKVIN
ICAHVLDDVAPGPAIKAALPSLTNPPSLSPIRRKGKEKEPGEPASVPLSPKKGSEASPAS
RQSDAPGPVTANKSSSLGSFCHLPSYLKLHDVLKATHANYKVTLDLQNSTEKFGGFLRSA
LDVLSQILELAMLQDIGKCVEEILGYLKSCFSREPVMATVCVQQLLKTLFGTNLASQFDG
LSSNPSKSQGRAQRLGSSSVRPGLYHYCFMAPYTHFTQALADASLRNMVQAEQDHDPSGW
FDVLQKVSTQLKTNLTSATKNRADKNAIHNHIRLFEPLVIKALKQYTTTTSVQLQRQVLD
LLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLVLLSYERYH
SKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGTNKADAGKELETQKEV
VVSMLLRLVQHHQVLEMFILVLQQCHKENEDKWKRLSRQIADVILPMLAKQQMHIDSHEA
LGVLNTLFEILAPSSLRPVDMLLRSMFVTPDTMASVSTVQLWISGILAILRVLISQSTED
IVLSRIQELSFSPYLICCPVINRLRDGDSTSTPEEHSEGRQIKSLPEETFSRFLLQLVGI
LLEDIVTKQLKVEMSEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAASRLFTVDSADS
SFYGLERLNAQVRAMVPTHPALVLLWCQILLLVSHTDYRWWAEVQQTPRRRSLSSTKSLS
PQMPGEEEDPGAACKLGMCNREIVRRGALILFCDYVCQNLHDSEHLTWLIVNHIQDLISL
SHEPPVQDFISAVHRNSAASGLFIQAIQSRCENLSTPTTLKKTLQCLEGIHLSQSGAVLT
LYVDKLLCTPFRVLARMVDTLACRRVEMLLAANLQSSAAQLPAEELSRIQEYLQSSGLAQ
RHQRLYSLLDRLRLATAPGSRGPSPPVTSHPLDGDGPLALETVVPDKDWYLHLVKSQCWT
RSDSALLEGAELVNRLPPSDMSTFMMNSEFNLSLLAPCLGLGMREVSGGQRSPLFEAARL
VTLDRVTSLVEQLPAAHHVFQPFLPVEPTAYWNKLNDLFGDAMLYRSLTTLARALAQYLL
VFPKLPSHLHLPPEKERDTVKFVVMTLEALAWHLIHEQIPLSLDLQAGLDCCCLALQLPS
LWSTLSSPEMVTHACSLIHCVRFVLEAVVVQPGDQLLSPERRMNIPKASRENEIDLDTQN
PAYITTACAMVAEMVESLPSVLALGHKRNSNTPAFLTSVLRNIIISLARLPLVNSYTRVP
PLVWKLGWSPKPGGDFGTAFPEIPVEFLQEKEVFKEFIYRINALGWTSRTQFEETWATLL
GVLVTQPLVMEQEESPPEEDTERTQINVLAVQAITSLVLSAMTVPVAGNPAVSCLEQQPR
NKPLKALDTRFGRKLSIIRGIVEQEIQAMVSKRENIATHHLYQAWDPVPSLSPATTGALI
SHDKLLLQINPERELGNMSYKLGQVSIHSVWLGNSITPLREEEWEEEEEEEADVPAPASP
PTSPVNSRKHRAGVDIHSCSQFLLELYSRWILPSGSARRTPIILISEVVRSLLVVSDLFT
ERTQFEMMYSALTELRRVHPAEDEILTQYLVPATCKAAAVLGMDKAVAEPVSRLLESTLR
SSHLPSKVGALHGALYVLECDLLDETAKQLVPVISDYLLSNLKGVAHCVNIHSQQHVLVM
CATAFYLIENYPLDVGPEFSASIIQMCGVMLSGSEESTPSIIYHCVLRGLERLLLSEQLC
RLDAESLVKLSVDRVNVHSPHRAMAALGLMLTCMYTGKEKLSPGRSSDPSPATPDSESVI
VAMERVSVLFDRVRKGFPCEARVVARILPQFLDDFFPPQDVMNKVIGEFLSNQQPYPQFM
ATVVYKVFQTLHTTGQSSMVRDWVMLSLSNFTQRTPVAMAVWSLSCFFVSASTSPWVSAV
LPHVISRMGKLEQVDINLFCLVATDFYRHQIEEELDRRAFQSVFEVVAAPGNPYHRLLTC
LRNVHKVAAC
NT seq
9393 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccttggagaagctcatgaaggccttcgaatccctcaagtccttccagcagcaa
cagcagcagcagcagcagcctccgccgccgccgcctcagcttcctcagccgccgccgcag
gcgcagccgccgccgcctcagccgcagccgccgccgcccccgccgcccccgccgcccccc
ggcccggccgtggccgaggagccactgcaccgaccaaagaaagaactctcagccaccaag
aaagaccgcgtgaaccattgtctgacaatatgtgaaaacatagtggcacagtcactcaga
aattctccagaatttcagaaacttctgggcatcgctatggaacttttcctgctgtgcagc
gatgatgccgagtcggatgtccggatggtggctgatgagtgcctcaacagagtcatcaaa
gccctgatggactccagtctgccgaggctgcagttagagctgtataaggaaatcaaaaag
aacggtgctccccggagccttcgcgccgccctgtggaggtttgctgagctggcgcacctg
gtccggcctcagaagtgcaggccttacttggtaaaccttttgccttgcctgactcgaata
agcaagagacctgaggaatctgttcaggagaccttggctgcagctgtacccaaaattatg
gcttcttttggcaattttgcaaatgacaatgaaattaaggttctactgaaggctttcata
gcgaatctgaagtcaagctccccaaccattcggcggacggcggctggctcagcagtgagc
atctgccagcactcgaggaggacccagtacttttacagctggctattgaacgtgctcttg
ggcttgctggtccccgttgagagtgaacactccaccctcctgattcttggggtgctgctc
acactcaggtacctggtgcccttgctgcagcctcaggtcaaggacacgagcctgaaaggc
agctttggggtgacgcggaaggaactggaagtctcaccctcaacagagcagctcatccag
gtctatgaactgaccttgcactacactcagcaccaagaccacaatgcggtgacaggcgcg
ctggagctcctgcagcagctgttgcggacgcccccgcctgagctcctgcgcgccctgagc
actccaggcggcgggccactctccaccatgtgccaccagcctggctgccggagccgcagc
ggcagcatagtggagctcctggctggagggggttcttcatgcagccctgtcctttcaagg
aaacaaaaagggaaagtgctctttggagaagcagcggccttggaggatgactccgagtcc
agatcagagggcagcagccccgccttcacagcctcagtcaaaggtgagattggtggtgag
ctggctgcgtcttctggagtctccactcctggctctgccagttcagctgcggactctgtg
ggccacgacatcatcactgagcagccccggtcacagcatacgctgcagccagactcggtg
gatctgaccggctgtgacctggcgagcgcggccaccgacggggacgaggaggatatcctg
agccacagctccagccagatcagtgccgtcccatctgacccagccatggacctgaatgat
ggcacccaggcctcctccccagtcagcgacagctcccagaccaccactgaggggcctgat
tcagctgtgaccccttcggacagttctgaaattgtgttagacggtgctgacagccagtat
tcggggatgcagatcggacagccaccggacgaggatgaagaagccacgggtgtcctccca
gatgaagatgcagatgctttccgaagctcttctcttgctcttcagcaagcacatttactg
agaagcatgggccacagcagacaggcctctgacagcagcatcgataaatttgtctccaaa
gatgaagctgctgaaccaggagatcaagaaaacaagccttgccggatcaaaggtgacata
gggcagtctaccgatgatgattctgttcctcttgtccattgtgtccgccttctgtctgct
tcatttttgctgactggggagaaaaatgtgttggttccggatagggacgtgagggtcagc
gtgaaggcgctggcgctcagctgtgtgggagctgctgtggcccttcatcccgagtccttc
ttcagcaaactttataaagtgcctcttgacaccatggagcaccctgaggagcagtacgtg
tcagacatcctgaactacattgatcacggagacccccaggtcagaggagccacggccgtt
ctctgtgggaccctcatctcctccatccttagcaggtcccgcttccaagtgggggactgg
atgggcacagtcagagccttgacaggaaatacattttctctggtggactgcattcctttg
ctgcagaaaactttgaaggatgaatcttctgtgacttgcaagttggcttgtacagctgtg
aggcactgtgtcatgagtctgtgcagcagcagccacagcgaactggggctgcaactggtc
accgacttgctgaccctgagggacagctcctactggttggtgaggacggagcttctggag
actcttgcagagattgacttcaggttggtaagctttttggaggcaaaagcagaaaacctg
catagagggacccatcattatacagggcttttaaaactgcaagaacgagtgctccatgat
gtggtcatctatctgctcggggacgaggaccccagggtgcggcacgttgccgcagcggcc
ttgataaggctggtcccgaagctgttctataaatgcgaccaaggacaagccgaccccgtc
gtggctgtggcgagagatcaaagcagtgtttacctgaagctcctcatgcacgagacgcag
cctccgtctcacttctccgtcagcaccatcactagaatatacagaggctataacttactg
ccaaccatgacagacgtcacggtggaaaacaacctctccagagtcatcgcagccgtttcc
cgcgaactggtcacgtccaccacgcgcgcactcacctttgggtgctgcgaagctctgtgt
ctcctttcaacagcctttcccgtctgcatttggagtttaggttggcattgtggggtgccc
ccactgagcgcctccgatgagtcgagaaagagctgtactgttggcatggccacgatgatc
ctcaccttgctatcatcagcgtggttccccctggatctctcagcccatcaggatgctttg
attttagccggaaacttgcttgcagccagtgcccccaaatctctgagaagttcgtggacc
tctgaagaagaggccagcccagcagctgccaagcaggaagaggtctggccagctctgggt
gaccggaccctggtgcccatggtagaacagctcttctcgcacctgctgaaggtgattaat
atctgtgctcacgtcttggacgacgtggctcccggaccagcaataaaggcagccttgcca
tctctcacaaaccctccatctctgagtcccatccgacggaagggaaaggagaaagaaccc
ggagagccagcctctgtgcccttgagccccaagaaaggcagtgaagccagtccagcctct
cgacaatctgatgccccagggcctgttacagcaaataagtcctcatcgctggggagtttc
tgtcaccttccttcgtacctcaaattgcacgacgtcctgaaagctactcacgccaactac
aaggttaccttggatcttcagaacagcactgaaaagtttgggggctttctgcgctctgcc
ttggatgttctctctcagatcctggagctggcgatgctgcaggacattgggaagtgcgtt
gaagagatcctggggtatctgaaatcctgcttcagtcgggaaccagtgatggcaactgtt
tgcgttcagcagctgttgaagactctctttgggaccaacttggcctcccagtttgatggc
ttgtcgtccaaccccagcaagtctcagggccgagcacagcgtctgggctcctccagtgtg
aggccgggcttgtaccactactgcttcatggctccatacacgcacttcacccaggcctta
gctgatgccagcctgaggaacatggtgcaggcggagcaggaccacgacccctcagggtgg
tttgatgtccttcagaaggtgtctacccagttgaagaccaacctcacaagcgccacgaag
aaccgcgcagataagaatgctattcataatcacatccgcttgtttgagcctctggttatt
aaggctctaaaacagtacacgaccactacgtccgtgcagctgcagaggcaggtgctggac
ctgctggcgcagctggtgcagttacgggtcaattactgtctgctggactctgatcaggtg
tttattggattcgtgctgaagcagtttgaatacattgaagtgggccagttcagggaatca
gaggcaattattccaaacatctttttcttcctggtattactatcttatgaacgctatcat
tcaaaacagatcattggaattcctaaaatcattcagctgtgtgatggcatcatggccagt
gggaggaaggctgtgacacatgccattccagctctgcagccaatagtgcatgacctcttt
gtactgagagggaccaacaaagccgacgctggaaaagagcttgaaacccaaaaagaggtg
gtggtgtcgatgctgctgagactcgtccagcatcatcaggtgctggagatgttcatcctg
gtcttgcagcagtgccacaaggagaatgaagacaaatggaaacgactgtcccggcagatc
gccgacgtcatcctcccgatgttagccaagcagcagatgcacattgattctcatgaagcc
cttggagtgttaaatactttatttgagattctggccccttcctccctccgtcccgtggac
atgttattacggagtatgtttgtcactccagatacaatggcatctgtaagcactgttcaa
ctgtggatctcaggaatcctagccattttgagggttctgatttcccagtcgactgaagat
attgttctctctcgtattcaggagctctccttctccccatatttaatctgctgtccagta
attaataggttaagagacggggacagtacttcaacaccggaagaacacagtgaaggaagg
caaatcaagagtttgccagaggaaacgttttcaaggtttctactacaactagttggcatt
cttttggaggatattgttacaaagcagctcaaagtggaaatgagtgaacagcaacatact
ttctattgtcaagagctaggcacgctgctaatgtgtctgattcacatcttcaagtctgga
atgttccgaagaatcacagccgctgcctccagactcttcacggtagacagcgccgacagc
agtttctacggcctggagaggctgaacgcgcaggtgcgcgccatggtgcccacgcacccg
gccctggtgctgctctggtgccagatcctgctgctggtcagccacaccgactaccgctgg
tgggcagaggtgcagcagacccccaggagacgcagtctatccagtacgaagtcactcagc
ccccagatgcctggagaggaggaggaccccggtgcggcctgcaagcttgggatgtgcaat
agagagatagtgcgaaggggagctctcattctcttctgtgattatgtctgtcagaacctg
cacgattcagagcacctaacgtggctcatcgtgaatcatatccaggacctcatcagtctg
tcccacgagcctcccgtgcaggatttcattagcgctgttcaccggaactccgccgccagt
ggcctcttcatccaggcaattcagtcccgctgtgaaaatctttccaccccgaccaccctg
aagaagacacttcagtgcttggaagggatccacctcagccagtcaggtgctgtgctgacg
ctgtacgtggacaagctgttgtgcactccgttccgtgtgctggctcgcatggtcgacacg
ctggcttgtcgccgggtggaaatgcttctggccgcaaatttacagagcagtgcggcccag
ctgcccgcagaggagctgagcaggatccaggagtatcttcagagcagcgggctggcgcag
agacaccagaggctctactccctgctggacaggcttcgtctcgccaccgcacctggctca
cgcggcccttctcctccggtcacgtcccacccgctggatggggatgggcccctggcactg
gagaccgtggttccagacaaagactggtacctgcatctagtcaaatcccagtgctggact
aggtcagattctgcactgctggaaggggcagaactggtgaatcggcttcctcccagtgac
atgagcacattcatgatgaactcggaattcaacttaagcctgctggccccatgcctgggc
ctgggcatgcgtgaagtctctgggggccagaggagccccctttttgaagcagctcgccta
gtgactctggaccgtgtgaccagcctggttgagcagcttcctgctgcccatcatgtcttc
cagccgttcctgcctgtggagcccactgcctactggaacaagttgaatgatctatttggg
gatgccatgttgtatcggtccttgaccactctggcccgggccctggcccagtacctgctg
gtgttccccaaactgcccagccatttgcacctcccccctgagaaggagagggacactgtg
aagtttgtggtcatgaccctcgaggccctggcgtggcatttgatccatgagcagatcccg
ctgagtctggaccttcaggcgggcctggactgctgctgcctggccctgcagctccccagc
ctctggagcacgctttcctccccggagatggtgacccatgcctgctctctcattcactgt
gtccgctttgttctggaagctgttgtggtgcagcctggggaccagcttcttagtccagaa
agaaggatgaacatcccgaaggcttccagagagaacgaaatagatttagacacacaaaac
ccggcatacatcaccacagcctgtgcgatggtggcagagatggtggagtctttgccatcg
gtgttagccttggggcacaaaaggaacagcaacacccccgcgtttctcacatcggtgctc
aggaacatcatcatcagcttggctcgcttacccctcgtcaacagctacacgcgcgtgccc
cccttggtttggaagctcggatggtcgcccaagccaggaggggactttggcacagccttc
cctgagatcccagtggagttcctccaggagaaggaagtctttaaagagttcatctaccgc
atcaatgcactaggctggaccagccgcacccagttcgaggagacgtgggccaccctcctt
ggtgtcctggtgactcagcccctggtgatggagcaggaggagagcccaccggaggaagac
acagagaggacccagatcaatgtcctggctgtgcaggccatcacgtcgctggtgctgagt
gcaatgaccgtgcctgtggccggcaaccccgctgtgagctgcttggagcagcagccccgg
aacaagcccctgaaagccctcgacaccaggtttgggaggaagctgagtattatccgagga
attgtagagcaggaaatccaagcgatggtttcaaagagagagaacatcgccacccatcac
ttataccaggcgtgggaccccgtcccttctctgtctccagctacaacaggtgccctcatc
agccacgacaagctcctgctacagatcaaccccgagcgggagctggggaacatgagctac
aagcttggacaggtatccattcactccgtgtggctggggaacagcatcacgcccctgaga
gaggaggagtgggaggaagaggaagaggaggaagccgatgtccctgccccggcatcacca
cccacgtcaccagtcaactccaggaagcaccgggcgggggtcgatatccactcctgctcc
cagtttctgcttgagttgtatagtcgctggatcctgccgtcaggttcagcccgaaggacg
cccatcatcctgatcagtgaagtggttcgatccctcctggtggtgtcggacttgttcacg
gagcgcacccagtttgagatgatgtactcggcgctcacagagctgcggagggtgcaccct
gccgaagatgagattctcacccagtacctggtgcctgccacctgcaaggcggctgctgtc
ctcgggatggacaaggctgtggcagagccggtcagccggctgctggagagcacgctgagg
agcagccacctgcccagcaaggttggggccctgcacggtgcgctctatgtgctggagtgt
gacctcctggatgagacggcaaagcagctcgtcccagtcatcagcgactatctcctctcc
aacctcaagggggtggcccactgcgtgaacattcacagccagcagcacgtgctggtcatg
tgcgccaccgccttctacctgatcgagaactatcccctggacgtgggcccagagttctca
gcctcaatcatacagatgtgtggggtgatgctgtccggaagtgaggaatccaccccatcc
atcatctaccactgtgttctgcggggcctggagcgcctcctgctctctgaacaactctgc
cggctggatgcggagtccctggtcaagctgagtgtggacagagtgaatgtgcacagccca
caccgggccatggccgccctgggcctgatgcttacctgcatgtacacaggaaaggagaaa
cttagtccgggcagaagctcagaccccagccctgccaccccagacagcgagtcagtgatt
gtggcaatggagcgcgtgtctgttctttttgacagggtcaggaaagggttcccctgtgaa
gccagagtggtggcacggatccttcctcagtttttagatgacttcttcccaccccaggac
gtcatgaacaaagtcattggagaatttctgtccaaccagcagccgtacccacagttcatg
gccactgttgtgtacaaggttttccagactctacacaccactgggcagtcatccatggtc
cgggactgggtcatgctgtccctctccaacttcacgcagaggaccccagtggccatggcc
gtgtggagcctctcctgcttcttcgtcagtgcttccaccagcccatgggtctcggctgtc
cttccccacgtcatcagcaggatgggcaagctggagcaagtggacattaacctcttctgc
ctggtggccacggacttttacagacaccagatagaagaggagctggaccgccgggccttt
cagtccgtgttcgaggtggtcgcggcaccaggaaacccgtatcatcgactgctgacttgt
ttgcggaatgtccacaaggtcgctgcgtgctga
DBGET
integrated database retrieval system
