KEGG   Enhydra lutris kenyoni (northern sea otter): 111150792
Entry
111150792         CDS       T05871                                 
Name
(RefSeq) roquin-1 isoform X1
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
elk  Enhydra lutris kenyoni (northern sea otter)
Brite
KEGG Orthology (KO) [BR:elk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:elk03000]
    111150792
   04121 Ubiquitin system [BR:elk04121]
    111150792
Transcription factors [BR:elk03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    111150792
Ubiquitin system [BR:elk04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    111150792
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 Prok-RING_4 zf-CCCH zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 zf-CCCH_UNK FYVE zf_CCCH_4 zf-CCCH_4 Vesi_VP2 PaaA_PaaC Baculo_IE-1 zf-RING_4 zf-RING_6 zf-RING_10
Other DBs
NCBI-GeneID: 111150792
NCBI-ProteinID: XP_022364101
UniProt: A0A2Y9JTN6
LinkDB
Position
Unknown
AA seq 1131 aa
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQTHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSAAVLPDE
GAVDLPSRKTPALPNGIVSAGSTVTQLIPRGTDATYDSSLKPGKIDHLSSSAPGSPPDLL
ESVPKSISALPVNPHPIPPRGPTDLPPMPVTKPLQMVPRGSQLYPAQQAEVYYQDPRGAA
PPFEPAPYQQGMYYTTPQCVSRFVRPPPSAPEPGPPYLDHYPPYLQDRVVNSQYGTQPQQ
YPPMYPPHYDGRRMYPAQSYTREEIFRESPIPIEVPPAAVPSYVPESRERYQQMEGYYPV
APHPTQIRPSYRDSPYSRLPPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPT
LPPTFHQEEFLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAAASVEMM
NVESKGMRDQRLDLQRRAAETSDDDLIPFGDRPTVSRFGAISRTSKTIYQGAGPMQAMAP
QGAPTKPINISDYSPYGTHGGWGGSPYSTHQNIPSQGHFSERERLSMSEVASHGKPLPSA
EREQLRLELQQLNHQISQQTQLRGLEAVSNRLVLQREVNTLAGQSQPPPPPPKWPGMISS
EQLSLELHQVEREIGKRTRELSMENQCSLDMKSKLNTSKQAENGQPEPQNKVPAEDLTLT
FSDVPNGSALTQENISLLSNKTSSLNLSEDPEGGGDNNDSQRAGVTPTSAP
NT seq 3396 nt   +upstreamnt  +downstreamnt
atgcctgtacaagctccacagtggacggatttcctctcctgcccaatttgcactcagact
ttcgatgaaacaattcgaaagcccatcagtttgggttgtggccatactgtctgcaagatg
tgcctgaataaactccaccgcaaggcttgcccatttgaccagaccactatcaatacagac
attgagctcctccccgtgaactcagcattgctgcagctggtgggtgctcaggtccctgag
cagcaacccattactttgtgtagtggggttgaagatacaaagcattatgaggaagccaag
aaatgtgtagaagaattagcattgtacctgaaaccactcagcagtgctagaggagtgggt
ctgaatagcactactcagagtgttctgagtcgcccaatgcagaggaagctggtgactctg
gtccactgccaactagtggaagaagaaggcaggattcgtgctatgagagcagcccgatct
ttaggtgaacgaacagttacagagctcattcttcagcaccagaatcctcagcaactctcc
tctaatctttgggcagcagtcagggctaggggctgccagttccttggaccagcaatgcag
gaggaagctctaaagctggttctcctggccttggaagatggttctgctctgtcaaggaaa
gtcttggttctctttgtggtgcaaaggttggagccgcggtttcctcaggcctctaaaact
agcattgggcatgttgttcagctcctttatagagcttcctgcttcaaggtcaccaagcgt
gatgaagactcttctttgatgcaactaaaggaagaatttagaacctacgaagctctgcgg
cgagaacatgactcccagatagtgcaaattgctatggaagcaggcttacgaattgcacca
gaccaatggtcctctttactttatggagaccagactcacaagtctcatatgcagtcaatt
attgacaagttgcagaccccagcctcttttgcacaaagtgttcaggaactaacaattgct
ctccagcgaactggagatccagcaaatttgaaccgactaagaccccatttggagctattg
gcaaacattgaccctagtccagatgctcctcctcctacttgggagcagctagaaaatggg
ctggttgctgtgcggactgtggtacatgggctagtagactatatccagaaccatagcaaa
aagggagcagatcaacagcagcctccacagcatagcaaatataaaacatacatgtgtcga
gatatgaagcagagaggaggatgccctcgtggggccagctgtacatttgcacactcacag
gaggaactggagaagtttcgtaaaatgaataaacgcctagttcccagaagacccctgagt
gcctctttgggtcaacttaatgaggtgggcctgccttcagcagctgtccttccagatgaa
ggtgcagtggatctgcctagcagaaaaacccctgctctgccaaatggaattgtatcagca
gggagtacagtaacacagctgattccacgagggacagatgctacctatgattctagtctg
aagccaggaaagatagatcatctgagcagtagcgcccctggatctcctcctgacctgcta
gaatctgtccctaagagtatttctgccttacctgtgaatccacatcctatacctccaagg
gggccgacagatttgcctccgatgcctgtcaccaaaccacttcagatggtaccacgaggt
tctcagttgtacccggcacagcaggcggaggtttattaccaggaccctcgaggagctgct
ccaccgtttgaaccagcaccgtatcagcagggtatgtactatactacaccacagtgtgtg
tctcgctttgtcagacctccaccatctgctcctgaacctggtcctccctacttggatcat
tatccaccctatctccaagaccgtgtagtcaattctcagtatggcacacagccacaacag
tacccacctatgtacccaccacactatgacggccgccgaatgtaccctgctcagtcttac
acaagagaggagattttccgagaaagtcctatacccattgaggttccacctgcagcagta
ccatcctatgtaccagaatccagagaaagataccaacaaatggagggttactatccagtg
gctcctcatccaactcagatcagaccttcgtacagagactctccttatagccggcttcct
cctcctcctcctcagccccatcctagtctagatgagctacatcgaagacgaaaggaaata
atggcccagctagaggaaaggaaggtcatctctccacctccttttgcaccttcaccaaca
ttgcctcctacctttcatcaagaggaatttctggatgaagacttgaaggtagctgggaaa
tacaaaggaaatgattatagccagtattctccctggtcatgtgacaccatcggctcctac
attggaaccaaagatgcaaaacccaaagatgtggtggcagcagcgagtgtggaaatgatg
aatgtggagagtaaaggaatgagagatcagcgactggatcttcagagaagagcagcagaa
accagtgatgatgaccttatcccatttggagaccgaccaactgtatctcggtttggtgcc
atctctcgaacctccaaaacaatataccagggtgctggtccaatgcaggccatggcacct
cagggagctcccacaaaacctattaatatttcagattatagtccatatggaacccacggt
ggctggggaggttctccatattcaactcatcaaaacattccttctcagggacacttcagt
gagagggagagactgtccatgtcagaagtggccagtcatggaaaaccccttccatctgct
gagagggaacagctgcgactagaattgcaacaactaaaccatcaaattagccaacagact
cagctacgtgggctagaggctgttagtaacaggctggtgttgcagagggaggtgaacacc
ctggcaggccagtcacagcccccaccaccacctccaaagtggcctggaatgatttcaagt
gagcagttgagcttggaactgcaccaggtggaaagggaaatcgggaagagaacccgggaa
ctgagtatggagaaccagtgttccctggacatgaaaagcaaattgaatacaagtaagcaa
gctgaaaatggacaaccagaaccacaaaataaggttccagctgaggaccttacattgaca
ttcagcgatgtaccaaatggctcagctttgacacaagagaatatcagcctcctgtcaaac
aagaccagctctctgaacctgtcagaggaccccgagggaggaggtgacaacaatgactcc
cagagagcaggagtcacacccacttctgctccctaa

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