Enhydra lutris kenyoni (northern sea otter): 111153544
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Entry
111153544 CDS
T05871
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
elk
Enhydra lutris kenyoni (northern sea otter)
Pathway
elk05017
Spinocerebellar ataxia
elk05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
elk00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
111153544
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
111153544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
elk04131
]
111153544
Membrane trafficking [BR:
elk04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
111153544
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
111153544
NCBI-ProteinID:
XP_022368323
UniProt:
A0A2Y9K5E6
LinkDB
All DBs
Position
Unknown
AA seq
873 aa
AA seq
DB search
MGTSARWALWLLLALCWAPRESRATGAGRKAKCEPSQFQCTNGRCITLLWKCDGDEDCAD
GSDEKNCVKKTCAESDFVCNNGQCVPSRWQCDGDPDCEDGSDENPEQCHMRTCRINEISC
GARSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPDEFTCSSGRCISRNFVCNGQDDCS
DGSDELACAPATCGAHEFQCGTSSCIPLSWVCDDDADCSDQSDESLEQCGRQPVMHAKCP
ASETQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGI
RDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDIGKVCNQEQDCRDWSDEPLKECHVNEC
LVNNGGCSHICKDLVIGYECDCAAGFELIDKKICGDIDECQNPGICSQICINLKGGYKCE
CSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRNTVALDADIAA
QKLFWADLSQKAIFSASIDDKVGRHIKMIDNVYNPAAIAVDWVYKTIYWTDVASKTISVA
TLDGTKRKFLFNSDLREPASLALDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQ
WPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWI
DGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHELVQPSGKNWCEEDMPNGGCEYLCL
PAPQINDHSPKYTCSCPNGYRLDENGRECHSSATPVTYSETKGIHTTEISPTTGLVPGGI
NVTTAVSEATVPPRGTSAAWAILPLLLLAMAAVGGYLMWRNWQHKNMKSMNFDNPVYLKT
TEEDLSIDIGRHSASVGHTYPAISVVSTDDDLA
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgtccgcgcgctgggcgctctggctgctgctcgcgctgtgctgggcgccccgg
gaaagccgcgccaccggagcgggaagaaaagccaaatgtgaaccctcccaattccagtgc
acaaacggccgctgtattacgttgctgtggaaatgcgacggggacgaagactgcgctgac
ggcagtgatgaaaagaactgtgtgaagaagacgtgtgccgagtcagactttgtgtgcaac
aatggccagtgcgtccccagccggtggcagtgtgacggggatcccgactgcgaagacggc
tctgatgaaaacccagaacagtgccatatgagaacatgccgcataaacgaaatcagctgt
ggcgcccggtccactcagtgtatccccgtgtcctggaggtgtgatggtgaaaatgattgt
gacagtggcgaagatgaagagaactgtgggaacattacgtgcagccccgacgagttcacc
tgctccagcggccgctgcatctccaggaatttcgtctgcaacggccaggacgactgcagc
gacggcagcgacgagctggcgtgcgcgcccgccacgtgcggcgcgcacgagttccagtgc
ggcacctcctcctgcatccccctcagctgggtgtgcgacgacgacgccgactgctccgac
cagtccgacgagtcgctggagcagtgcggccgccagcccgtgatgcacgccaagtgcccg
gccagcgagacccagtgcggctccggcgagtgcatccacaagaagtggcgctgcgatggg
gaccccgactgcaaagacggcagtgacgaggtcaactgtccttcgcgcacctgccgccct
gaccagttcgagtgcgaggacgggagctgcatccacggcagcaggcagtgcaatggcatc
cgggactgcgtggacggctctgacgaggtcaactgcaaaaacgtcaatcagtgcttgggc
cctggcaagttcaagtgcagaagtggggagtgcatagatatcggtaaagtatgtaaccag
gagcaggactgcagggactggagtgacgagcccctgaaagaatgtcatgtaaatgaatgc
ttggttaataatggcggctgttctcacatctgcaaagacctcgtgataggctacgaatgt
gactgcgcagctgggtttgaactgatagataagaaaatctgcggagatattgatgaatgc
caaaacccgggaatctgcagccaaatttgtatcaacttaaaaggcggttacaagtgtgaa
tgtagtcggggctatcagatggatcttgccactggcgtgtgcaaggcagtaggcaaagag
ccaagtctgatcttcacaaatcgaagagacatccggaagattggcttggagaggaaggaa
tatatccaactagtggaacagctaagaaacactgtagcccttgatgcggacattgctgct
cagaaactgttctgggctgatctaagtcagaaggccatcttcagtgcctcaattgatgac
aaggttggtagacatattaaaatgatcgacaatgtctataatcctgcagccatcgctgtt
gattgggtgtacaaaaccatctactggactgatgtggcttctaagactatttcagtagct
accctggatggaaccaagaggaagttcctgtttaactcggacttgcgggagcccgcctcc
ctcgctctggacccactgtctggctttgtgtactggtcagactggggagaaccagctaaa
atagaaaaagcaggaatgaatggatttgataggcggcccctggtgacagtggacatccag
tggcctaatggaattacactcgaccttataaagagtcgtctctactggcttgactccaag
ttgcacatgttgtccagtgtggacttgaatggccaagatcgcaggattgtcctcaagtct
ctggagttcctagctcaccctcttgcgctgacaatatttgaggatcgtgtctactggata
gatggagaaaatgaagccgtctacggtgccaataaattcactgggtcagagctggccact
ctggtcaacaaccttaatgatgcccaagacatcattgtgtatcacgaactcgtgcagcca
tcaggtaaaaactggtgtgaagaagacatgcccaatggaggctgtgaatacctgtgcctg
ccggccccacagattaacgatcactctccaaagtacacctgttcctgtcccaatgggtac
aggctagacgagaacggccgggagtgccacagttctgcaactcctgtgacttacagtgag
acaaaaggtatccacacaacagaaatttcaccaactactggactagttcctggagggatc
aatgtgaccacagccgtatctgaggccactgtccccccgagaggcacgtctgctgcctgg
gccatccttcctctcttgctcttggcaatggcggcagtaggtggctacttgatgtggcga
aactggcagcacaagaacatgaaaagcatgaactttgacaatcctgtgtacttgaagact
actgaagaggacctgtcaatagacattgggagacacagtgcttctgttggacacacgtac
ccagcaatatcagttgtaagcacagacgatgacctagcttga
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