KEGG   Enhydra lutris kenyoni (northern sea otter): 111154117
Entry
111154117         CDS       T05871                                 
Name
(RefSeq) syndecan-1
  KO
K06257  syndecan 1
Organism
elk  Enhydra lutris kenyoni (northern sea otter)
Pathway
elk04512  ECM-receptor interaction
elk04514  Cell adhesion molecule (CAM) interaction
elk04820  Cytoskeleton in muscle cells
elk05144  Malaria
elk05205  Proteoglycans in cancer
elk05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:elk00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    111154117
   04514 Cell adhesion molecule (CAM) interaction
    111154117
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    111154117
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    111154117
  09174 Infectious disease: parasitic
   05144 Malaria
    111154117
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    111154117
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:elk04131]
    111154117
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:elk04090]
    111154117
   00535 Proteoglycans [BR:elk00535]
    111154117
Membrane trafficking [BR:elk04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    111154117
CD molecules [BR:elk04090]
 Proteins
  111154117
Proteoglycans [BR:elk00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   111154117
SSDB
Motif
Pfam: Syndecan Romo1 Glycophorin_A
Other DBs
NCBI-GeneID: 111154117
NCBI-ProteinID: XP_022369227
UniProt: A0A2Y9K6D8
LinkDB
Position
Unknown
AA seq 305 aa
MRRAALWLWLCALALRLQPALPQTVAINVPPEDQDGSGDDSDNFSGSGAGALPDITLSQQ
SPSTWKDVVLLTAVPTAPEPTGTDNPTVSTSVLPTGEVPEEREAVLLAKVEPGFTDQEKE
TTHPPGETTPHPTTHRASTVRATTAPGPATSHPHRDMQPEHHEPSAGPRQLDPHTHHVED
RGPSATERTAEDGVSTQLPVGEGSGEQDFTFDLSGENVAGTVVEPNERNQPPVDREASQG
LLDRKEVLGGVIAGGLVGLILAVCLVGFMLYRMKKKDEGSYSLEEPKQANGGAYQKPSKQ
EEFYA
NT seq 918 nt   +upstreamnt  +downstreamnt
atgaggcgcgcggcgctctggctctggctgtgcgcgctggcgctgcgcctgcagccggct
ctcccgcaaactgtggccataaacgtgccccctgaagatcaggacggctctggggatgac
tctgacaacttctctggctctggtgcaggtgctctgccagatatcaccttgtcgcagcag
agcccatccacgtggaaggacgtggtgctcctgacagctgtgcccacggctccagagccc
actggcacagataaccccaccgtctccacctccgtcctgcccacgggagaggtacccgag
gagagggaggcggtgctcctggccaaggtggagcctggcttcaccgaccaggagaaggag
accacccacccacctggtgagaccacgccacacccgactactcaccgggcctcgacagtg
agagccaccacggccccggggcctgccacctcccatccccacagggacatgcagcctgag
caccatgagccctcggcgggacccagacagctcgaccctcacactcaccatgtggaggac
agaggtccttctgccaccgagaggaccgcggaggatggagtgtccactcagctcccagta
ggcgagggctctggggagcaggacttcacctttgacctgtctggggagaatgtggctggg
acagtggtggagcccaacgagcggaatcaacccccagtggaccgtgaggcctcacagggc
ctcctggacaggaaggaagtgctgggaggggtcatcgctggaggcctcgtggggctcatc
ttggccgtgtgcctggtgggtttcatgctctaccggatgaagaagaaggacgagggcagc
tactccttggaggagcccaaacaagccaatggcggagcctaccagaagcccagcaagcag
gaggagttctatgcctga

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