Enhydra lutris kenyoni (northern sea otter): 111155330
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Entry
111155330 CDS
T05871
Name
(RefSeq) general transcription factor IIH subunit 2 isoform X1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
elk
Enhydra lutris kenyoni (northern sea otter)
Pathway
elk03022
Basal transcription factors
elk03420
Nucleotide excision repair
elk05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
elk00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111155330
09124 Replication and repair
03420 Nucleotide excision repair
111155330
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
111155330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
elk03021
]
111155330
03400 DNA repair and recombination proteins [BR:
elk03400
]
111155330
Transcription machinery [BR:
elk03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111155330
DNA repair and recombination proteins [BR:
elk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111155330
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
111155330
NCBI-ProteinID:
XP_022371182
UniProt:
A0A2Y9KBQ9
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MFTSLSLLFTFKCMNLVPNILRKFTLSGFYRILNNTLKEKMDEEPERTKRWEGGYERTWE
ILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRHLYVVVDGSRTMEDQDLKPNR
LTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELSGNPRKHITSLKKAVDMTCH
GEPSLYNSLSMAMQTLKHMPGHTSREVLIIFSSLTTCDPSNIYDLIKTLKAAKIRVSVIG
LSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVSPPPASSSSECSLIRMGFPQHTIA
SLSDQDAKPSFSMAHLDSNTEPGLTLGGYFCPQCRAKYCELPVECKICGLTLVSAPHLAR
SYHHLFPLDAFQEIPLEEHNGEKFCYGCQGELKDQHVYVCAVCQNVFCVDCDVFVHDSLH
CCPGCIHKIPTSSNI
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtttacttccctctctttacttttcacatttaaatgtatgaatttggtgccaaatatt
cttagaaaattcacactcagtggtttttacaggatattgaataatacattaaaggaaaaa
atggatgaagaacctgaaagaactaagcgatgggaaggaggctatgaaaggacgtgggag
attcttaaagaagatgaatcgggatcacttaaagctacgatagaagacattctcttcaaa
gcaaagagaaaaagagtatttgagcaccatggacaagttcgacttggaatgatgcgtcat
ctttatgtggtagtagatggatcaagaacaatggaagaccaagacttaaagccaaataga
ctgacttgtactttaaagttgttggaatacttcgtagaagaatattttgatcaaaatcct
attagtcagattggaataattgtaacaaagagtaaaagagctgaaaaactgactgaactc
tcaggaaacccaaggaaacatataacatctttgaagaaagctgtagatatgacctgccat
ggagaaccatctctctataactccttaagcatggctatgcaaactctaaaacacatgcct
ggacatacaagtagagaagtcctaatcatctttagcagcctcacaacttgtgatccatct
aatatctatgatctaatcaagaccctaaaggcagctaaaataagagtgtctgttatcgga
ttgtctgcagaggttcgggtttgcactgtacttgctcgtgaaactggtggcacataccat
gttattttagatgaaagccattacaaagaattgctgacacatcatgttagtcctccacct
gctagctcaagttctgaatgttcacttattcgcatgggatttcctcagcataccattgct
tctctgtctgatcaagacgcaaaaccctctttcagcatggcgcacttggatagcaacact
gagccaggacttacattaggaggatacttctgcccacagtgtcgggccaagtactgtgag
cttccagttgaatgtaaaatctgtggtctcactttggtgtctgctccacatttggctcgg
tcctaccatcatttatttcctttggatgcttttcaagaaattcctctagaagaacataat
ggagaaaaattttgttatggatgtcagggggaattgaaagaccaacatgtctatgtttgt
gctgtgtgccaaaatgttttctgtgtggactgtgatgtttttgttcacgactctcttcat
tgttgtcctggctgtattcataagattccaacttcttcaaatatttga
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