Enhydra lutris kenyoni (northern sea otter): 111155469
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Entry
111155469 CDS
T05871
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
elk
Enhydra lutris kenyoni (northern sea otter)
Pathway
elk04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
elk00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
111155469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
elk03000
]
111155469
Transcription factors [BR:
elk03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
111155469
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
111155469
NCBI-ProteinID:
XP_022371343
UniProt:
A0A2Y9KDX5
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MSSPDAGYASDDQSQTRSALPAVMAGLGACPWAESLSPLADMKVKGEAVASSGAPAGPAG
RAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEE
AERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPQAATLGPEGGRVAMDGLG
LPFPEQGFPAGPPLLPPHMGGHYRDCQGLGAPPLDGYPLPTPDTSPLDGVEPDPAFFAAP
MPGDCPAAGPYSYPQASDYAGPPEPPVGPMHSRLSLEQAGPAMPGHVAPSSALQLYYNAI
SSPAAGGGRGFSMHPQQHPPGPGQPSPPPEALPCRDGGDPNQPAELLGEVDRTEFEQYLH
FVCKPEMGLPYQGHDSSVNLPDSHGAISSVVSDASSAVYYCNYPDV
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcccggatgcggggtacgccagtgacgaccagagccagacccgcagcgcgctg
cccgcggtgatggccgggctgggcgcctgcccctgggccgagtcgctgagcccccttgcg
gacatgaaggtgaagggtgaggcggtggcgagcagcggggcgccggctgggccggcgggc
cgagccaagggcgagtctcgcatccggcggccgatgaacgctttcatggtgtgggcgaag
gacgagcgcaagcgcctggcgcagcagaaccccgacctacacaacgcggagttgagcaag
atgctgggaaagtcgtggaaagcgctgactctggcggagaagcggcccttcgtggaggag
gccgagcggctgcgcgtgcagcacatgcaggaccaccccaactacaagtaccggccgcgg
aggcgcaagcaggtgaagagactgaagcgggtggagggcggattcttgcacggccttgcc
gagccacaggccgccacgctgggccccgagggcggccgcgtggccatggatggcctgggc
ctgcccttccccgagcagggcttcccggccggcccgccgttgctgcccccgcacatgggc
ggccactaccgcgactgccagggactgggagcgcctccgctcgacggctacccgctgccc
acgccggacacgtccccgctggacggcgtggagccggatcccgccttctttgccgctccg
atgcccggggactgcccagcggccggcccctacagctacccacaggcctcggactacgcg
gggcccccggagccgccagtcggccccatgcactcccgtctaagcctggaacaggcgggc
cctgcaatgccgggccacgtggcgccctccagcgccctgcagctgtactacaacgcgatt
agctcgcccgcggcgggcggcgggcgcggcttctccatgcacccgcagcagcacccaccc
ggccccgggcagccgtcgccccctcccgaggccctgccctgccgggacggcggggacccc
aatcagcccgccgagctcctcggggaggtggaccgcacggaatttgaacagtatctacac
tttgtgtgcaagcccgagatgggtctcccttaccagggacatgactctagtgtgaatctc
ccagacagccacggggcaatttcctcggtggtgtccgatgccagctctgcggtatattac
tgcaactaccctgacgtttga
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