Enhydra lutris kenyoni (northern sea otter): 111155716
Help
Entry
111155716 CDS
T05871
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XVIII) chain
KO
K06823
collagen type XVIII alpha
Organism
elk
Enhydra lutris kenyoni (northern sea otter)
Pathway
elk04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
elk00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
111155716
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
elk04147
]
111155716
00535 Proteoglycans [BR:
elk00535
]
111155716
00536 Glycosaminoglycan binding proteins [BR:
elk00536
]
111155716
Exosome [BR:
elk04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111155716
Proteoglycans [BR:
elk00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
111155716
Glycosaminoglycan binding proteins [BR:
elk00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111155716
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
111155716
NCBI-ProteinID:
XP_022371753
UniProt:
A0A2Y9KF18
LinkDB
All DBs
Position
Unknown
AA seq
1304 aa
AA seq
DB search
MAPRWPWLRPRSRSRSLLDVLAALVLLLGVRAASAEPETLGAEVRLLQLLGEPPPQQVTQ
VEDPDVGPAFVFGPDANSGQAARYHFPGRFFRDFSLHFHVRPATEDAGVLFAVTDAAQAV
VSVGVKLSGVRDGHQQIQLLYTEPGAARTHTAASFRLPAFTGQWTRFALSVDGATAALFV
DCELFQRVPLARSPRGLELEPGAGLFVAQAGGADPDKFQGAIAELRVRRDPHVSSLHCLE
EDDEDSGGASGDFGSGLEETREPLREPSGPSSKPSLPEAPPVTSPPLAAGGNEEDSRTEE
IEEETTVSALAARTLPSLDMVTAGSVWSLGGGLDEGPAVRSPEAPPVPGPQGPPGPPGPP
GKDGIPGRDGEPGDPGEDGRAGDPGPQGFPGTPGDAGPKGEKGDPGVGPRGPPGPQGPPG
PPGPSFRHDKLTFIDMEGSGFGGDLESLRGPRGFPGPPGPPGVPGLPGEPGRFGMNSSDV
PGPAGLPGVPGRDGPPGLPGTPGPPGPPGRDGGSGKTGQKGSPGDAGAPGPKGDKGDPGP
AGAPGENGLAGAPGPAGSPGPPGPPGPPGPGLTTGFDDMEGSGVPFWPTAQGASGPQGPA
GPPGVKGDPGVTGPPGAKGEVGADGPPGFPGLPGREGTAGAQGPKGEKGTQGEKGDPGRD
GVGQPGLPGPPGPPGPVVYMSEQDRALAGVPGPEGRPGFAGFPGPAGPKGDLGSKGQQGL
PGPKGEKGEPGPVFSPDGSMLAPGQKGAKGEPGFRGPPGPYGRPGHKGEIGFPGRPGRPG
MNGLKGEKGEPGHASVGFGVRGPPGPPGPPGPPGPPGVPIYDSNAFTESGRPGAPGLPGL
QGPSGPKGDKGDVGPPGPPGQFPLDLLPLEAEMKGEKGDRGDPGPKGERGEPGGGGFFSS
SVPGPPGPPGYPGIPGPKGESIRGQPGPPGPQGPPGIGHEGRQGPPGPPGPPGPPGPPSF
PGPYRQSFSPTAISVPGPPGPPGPPGPPGTMGTSSGQVRIWATYQTMLDKVPEVPEGWLI
FVAEREELYVRVRGGLRKVLLEARTPLPRGMDEVAALQPPAGNPYPRRELTHSTVRPWRA
DDILASPPRLPDPQPYPGAPHHGSYRHFQPARPTGGPTHSHTHQDYQPVLHLVALNSPQP
GGLRGIRGADFQCFQQARAARLPGTFRAFLSSRLQDLYSVVRRADRTGVPIVNLRDEELF
PSWEALFSGSEGQLKPGARIFSFDGRDVLQHPAWPQKSVWHGSDPSGRRLTDSYCETWRT
ETAGVMGQASSLLAGRLLEQKAVSCHHAFIVLCIENSFMTSSSK
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgaggtggccttggctgcggccgcggtcgcggtcgcggagcctcctggacgtg
ctcgccgcgctggtcctgctgctcggagtgcgcgcggcctccgcggagccagaaactctg
ggcgcggaggtgaggctcctgcagctgctcggagagcccccgccccagcaggtgacccag
gtggaggaccccgacgtggggccggccttcgtcttcggcccggatgccaacagcggccag
gccgcccgctaccacttccccggccggttcttccgcgacttctcgctgcacttccacgtc
cggcccgccaccgaggacgcgggggtgctgttcgccgtgacggacgcggcgcaggcggtg
gtctccgtgggcgtgaagctgtcgggcgtgcgcgacgggcaccagcagatccagctgctg
tacacggagccgggggccgcgcggacccacacggccgccagcttccgcctgcccgccttc
accggccagtggacgcgctttgccctcagtgtggacggcgcgaccgcggcgctgttcgtg
gactgcgagttgttccagcgggtgccattggcgcgctccccgcggggcctggagctggag
cccggcgctggcctcttcgtggcccaggccggaggagcggaccctgataagttccagggg
gcgatcgcagagctgagggtgcgcagggacccccatgtgagctccctgcactgtctggag
gaggacgatgaggacagcggcggggcgtccggagacttcgggagcgggctggaggagacc
cgggagcccctcagggagccgtcgggtccgtcgtccaaacccagcctccctgaggctccc
ccggtcacttctccacccttggctgcgggcgggaatgaggaagattccagaaccgaagaa
attgaggaagaaaccacggtgtctgcgttggcagctcggaccctccccagcttggatatg
gtcaccgcagggagcgtttggagcctcgggggcggcctggatgagggtcctgctgtgcgg
agccctgaggcaccgcctgtacccgggccgcagggcccccctggccccccagggccacca
gggaaggatggcatccccggaagggacggcgagccaggggatcctggtgaagacgggaga
gcgggcgaccctgggccacagggctttcccgggaccccgggagacgcgggccccaagggc
gagaagggggaccccggggtcgggccgagaggacctccaggaccccaagggcctccaggg
ccaccaggaccctccttcaggcatgacaagctgaccttcatcgacatggaggggtccggg
ttcggcggagacctggagagcctccggggccccagaggcttccccggccccccggggccc
ccaggcgtcccaggcctgcccggagagccaggccgcttcgggatgaacagctcagacgtg
ccaggacccgccggcctccctggtgtgcccgggcgggacgggccccctgggcttcctggc
accccgggaccgccaggccctccaggaagagacgggggatcagggaagacgggccagaaa
ggcagccccggcgacgcgggcgccccgggacctaagggagacaagggtgaccccggcccc
gctggcgctcctggggagaatggcttggcaggagcccccggaccagccggatcaccaggg
ccccccggcccccccgggccaccaggaccaggactcaccacagggtttgatgacatggaa
ggctccggggtacccttctggccgacggctcaaggagccagcgggccgcagggacccgcc
ggcccacccggggtcaagggggatcccggggtaaccggaccgccgggtgccaagggagaa
gtcggggctgatggacctcctgggttccccggcctccctggcagagagggcacagctgga
gcccagggacccaaaggagaaaaagggacccagggagagaaaggcgacccagggagggat
ggagtgggacagcccggcctccccggaccccccggacccccagggcctgtcgtctacatg
tcggagcaggatagagcgctggccggcgtgcctggacccgagggccggccggggttcgct
ggctttcccggaccggctgggccaaagggagatctgggctcaaaaggccagcagggcctc
ccgggacccaagggtgagaagggcgagcccggcccggtcttcagccccgatggcagcatg
ctggcaccaggccagaaaggggccaagggagagcccggcttccgaggacccccgggtccc
tacggacggccggggcacaagggagagattggcttccctgggcggccgggtcgccccggg
atgaacggattgaagggggagaagggggagccaggacacgccagcgtcggcttcggtgtg
aggggtccacccggtccccccgggcctccggggcccccagggcctcctggggttcccatt
tatgacagcaacgcctttacggagtccggccgccctggagccccaggattgccagggctc
caggggccttctggacccaagggtgacaaaggagatgtgggccctccaggaccaccaggg
cagttcccgttggacctgctcccgctggaggctgaaatgaagggggagaagggggaccga
ggggaccctgggccgaagggcgaacggggtgagcccgggggtggtggattcttcagctca
agtgtgcctggaccccccggcccaccaggctaccctgggattccgggtcccaagggagag
agcattcggggccagcctggcccacctggacctcagggaccccctggcatcggccatgag
gggcgtcagggaccccctgggccccctggacccccgggtcccccagggcccccttccttt
cctggcccttaccggcaaagtttctctcctacagccatcagtgttcctggccccccaggc
ccacctgggccccctgggccccctggaaccatgggcacgtcctccgggcaggtgaggatc
tgggccacgtaccagaccatgctggacaaggtgcctgaggtgccggagggctggctcatc
ttcgtggccgagagggaggagctgtacgtccgggtccgtggcgggctgcggaaggtcctg
ctggaggcacggacgccactcccacgtgggatggacgaggtggccgccttgcagccccct
gcgggcaacccatacccccggcgggagctcacccactccacggtgcggccctggcgggca
gatgacatcctggccagccccccgcgtctgccggacccccagccctaccctggggcccca
caccatggctcctaccggcacttccagccggctcgccccaccggcgggcccacccacagc
cacacccaccaggactaccagccggtgctgcacctggtggccctgaacagtccccagccg
ggtggcctgcgtggcatccgaggggccgacttccagtgcttccagcaggcgcgcgctgcc
aggctgcctggcaccttccgcgccttcctgtcctcgaggctgcaggacctctacagcgtg
gtgcgccgagccgaccgcaccggcgtgcccatcgtcaacctcagggacgaggagctgttc
cccagctgggaggccttgttctcaggctccgagggccagctgaagcctggggcccgcatc
ttctctttcgacggcagagacgtcctgcagcacccggcctggccccagaagagcgtgtgg
cacggctcggaccccagcgggcgccggctgaccgacagctactgtgagacgtggcggaca
gagactgcgggcgtcatgggccaggcgtcctccctgctggccggccggctgctggagcag
aaggccgtgagctgccaccatgccttcatcgtgctctgcatcgagaacagcttcatgacc
tcctcctccaagtag
DBGET
integrated database retrieval system
