Enhydra lutris kenyoni (northern sea otter): 111156355
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Entry
111156355 CDS
T05871
Name
(RefSeq) ATP-dependent RNA helicase DDX55 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
elk
Enhydra lutris kenyoni (northern sea otter)
Brite
KEGG Orthology (KO) [BR:
elk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
elk03009
]
111156355
Enzymes [BR:
elk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111156355
Ribosome biogenesis [BR:
elk03009
]
Eukaryotic type
Pre-60S particles
Helicases
111156355
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
111156355
NCBI-ProteinID:
XP_022372855
UniProt:
A0A2Y9KUJ4
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MEHVTEGSWESLPMRLHPRVLGALRELGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKT
LAFVIPVLEILLRREEKLKKNQVGALIITPTRELAIQIDEVLAHFTKHFPQFGQTLWIGG
RNPGEDVARFKEQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMG
FEASINTILEFLPKQRRTGLFSATQTQEVESLVRAGLRNPVRISVKEKGVAASSTQKTPS
RLENYYMVCKADEKFNQLVHFLRNHKQEKHLVFFRGQSTCACVEYYGKALEALVKGVQIM
CIHGKMKHKRDKIFMGFRRLQRGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCG
RTARIGHGGSALVFLLPMEESYVSFLEINQKCPLQEMKLQKNTGDLLPKLKSMALADRAV
FEKGMKAFVSYVQAYAKHECNLIFRIKDLDFASLARGFALLRMPKMPELRGRQFPDFVPA
DVNTDTIPFKDKVREKQRQKLLEQQRKEKRENEGRRKFIKNKAWSKQKAKKEKKKKMNEK
RKREEGSDIEDEDMEELLNDTRLLKKFKKGKITEEEFEKGLFSSGKRTVPRADMEIPDSE
EDC
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgtgacggagggctcctgggagtcgctgcccatgcggctgcacccgcgggtg
ctgggcgcgctgcgggagctgggcttcccgtacatgacgccggtgcagtctgcaaccatc
cctctgttcatgaaaaacaaagatgtcgctgcagaggcggtcacaggtagcggcaaaacg
ctcgcttttgtcatccccgtcctggaaattcttctgagaagggaagagaagctaaaaaag
aatcaggttggggcgctcatcatcacacccacgcgggagctggctattcagatagatgaa
gtcctggcgcatttcacgaagcacttcccgcagtttggccagactctctggatcggaggc
aggaatcctggagaagatgttgcaaggtttaaggaacaaggtgggaacatcattgtggcc
acgccaggccgcctggaggacatgttccggaggaaggcagaaggcttggatctggccagc
tgtgtgaggtccctcgacgtcctggtgttggatgaagcagacagacttctggacatgggg
tttgaggcaagcataaacaccatcctggagtttttgccaaagcagaggagaacaggcctt
ttctctgccactcagacgcaggaagtggagagcctggtgcgagcagggctacggaacccc
gtccggatttcggtgaaggagaagggcgtcgcggccagcagcactcagaaaactccttcc
cgcctggagaactactacatggtatgtaaggcagatgagaaatttaaccagttggtacat
tttcttcgaaatcataagcaggaaaaacacctggtcttcttcaggggccaaagcacctgt
gcctgtgtggaatactacggaaaggctctggaggccctggtgaagggtgtgcagatcatg
tgcattcacgggaagatgaaacacaagcgcgataagatcttcatggggttccgcagattg
cagagagggattttagtgtgcacggatgtcatggcccgaggaatagacattcctgaagta
aactgggttttgcagtacgaccctcccagcagcgcaagtgcctttgttcatcgctgtggc
cgtacagcccgcattggccacggtggcagcgcactcgtgttcctccttcccatggaagag
tcctacgtcagtttccttgaaattaaccaaaaatgccccctgcaggagatgaaactccag
aagaacacaggagacctccttccaaagctcaagtccatggccttggctgacagagcggtg
tttgaaaagggcatgaaagcctttgtgtcctatgtccaggcttatgcgaagcatgaatgc
aacctcatcttcagaataaaggatcttgattttgctagtcttgctcgaggatttgccctg
ctgaggatgcccaagatgccagaactcagaggaaggcagtttccagatttcgtgcctgcg
gatgttaacacagacaccattccatttaaagataaagttagagagaagcagaggcagaaa
ctactggagcaacaaagaaaagagaaaagagaaaatgaagggagaagaaaattcataaaa
aataaagcttggtcaaagcagaaggccaaaaaggagaagaagaaaaaaatgaatgaaaaa
aggaagagggaagagggttccgatattgaagacgaggacatggaggaacttctcaacgac
acgaggctcttgaaaaagtttaagaaaggcaaaattactgaagaagaatttgagaagggg
ttgttttcaagtggcaagagaacagtcccgagagcagatatggagatccctgattcggaa
gaggactgctga
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