Enhydra lutris kenyoni (northern sea otter): 111156663
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Entry
111156663 CDS
T05871
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
elk
Enhydra lutris kenyoni (northern sea otter)
Pathway
elk00100
Steroid biosynthesis
elk01100
Metabolic pathways
Module
elk_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
elk00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
111156663
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
elk01006
]
111156663
Enzymes [BR:
elk01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
111156663
Prenyltransferases [BR:
elk01006
]
Terpene biosynthesis
Squalene/phytoene synthase
111156663
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
HAUS4
uDENN
Motif
Other DBs
NCBI-GeneID:
111156663
NCBI-ProteinID:
XP_022373409
UniProt:
A0A2Y9KQ27
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MAVAACGTKAMSLFKRTFVLSPAAAPRGTGTGAGSPPRGCPLSPAAWPSKDWPRGEGVCG
RLRTPPSACRWPQSHSCSSASPTSVCLLCPQDSMSSSLKTCYKYLNQTSRSFSAVIQGLD
GEMRHAVCIFYLVLRALDTLEDDMTISIEKKVPLLHNFHSYLYEPDWRYMESKEKDRQVL
EDFPTISLEFRNLAEKYQTVIVDICQKMGFGMAEFLDKQVTSEQEWDKYCHCVAGLVGIG
LSRLFSLSELEDPLVGEDTERANSMGLFLQKTNIIRDYLEDHREGREFWPQEVWGKYVKK
LGDFAKPQNIDSAVLCLNELITNALHHIPDVITYLSRLRNQSVFNFSAIPQVMAIATLAA
CYNNQQVFKGVVKIRKGQAVTLMMDATNMPVVKAIIYQYIEEIYHRIPSSDPSSGKTRQI
ISTIRTQNLPNCQLISRSHYSPLYLSFVMLLAALSWQYLSTLSQVTEDYVQTGEH
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggccgtggctgcctgcggcaccaaggccatgtccctgttcaagcggacctttgtgctg
agtcctgccgcggcgccccggggcacaggcacgggcgccggctccccgccgcgcggctgc
cccttgtctcccgccgcctggccctccaaggactggccgcggggggagggcgtctgcggc
cggctgcgcaccccgccgtcagcctgccgctggccccagtcccactcctgctcctccgca
tctcccacctcagtgtgtcttctctgtccccaggactcaatgagcagcagcttgaaaact
tgctacaagtatctcaatcagaccagtcgcagtttttcagctgtcatccaggggctggat
ggggaaatgcgccatgcggtatgcatattttatctggtcctccgagccctggacactctg
gaagatgacatgaccatcagtatagaaaaaaaggttccactgctacacaactttcactct
tacctttatgaaccagactggcggtatatggagagcaaggagaaggatcgacaagtgcta
gaggacttcccaacgatctccctcgagtttagaaatttggctgagaagtatcaaacagtg
attgttgacatttgccagaaaatgggatttgggatggcggagtttttggataaacaagta
acctctgaacaggagtgggacaagtactgtcactgtgtcgccgggctggtgggaattggc
ctttcccgtctgttctcactctcagagttagaagaccccttagttggtgaagacacagaa
cgtgccaattctatgggcctgtttctgcagaaaacaaacatcattcgtgattatctggaa
gaccatcgagaaggcagagagttttggcctcaagaggtttggggcaagtatgttaagaag
ttgggcgattttgctaagccacagaacattgattcagctgtgctgtgcctgaacgaactt
ataaccaacgcacttcaccacatcccagatgtcatcacttatctttcaagacttagaaac
caaagtgtgtttaacttctccgctattccacaggtgatggccattgccactctggctgcc
tgttacaacaatcagcaggtgttcaaaggcgtagtgaagatccgaaaagggcaggcggta
actctgatgatggacgccaccaatatgccagtggtcaaggctataatctaccagtacata
gaagagatttatcatagaatccccagctcagacccatcttctggtaaaaccaggcagatc
atctccaccatcaggacccagaatcttcctaattgtcagctgatctcccgaagtcactac
tcccctctttacctgtcatttgtcatgctgttggctgccctgagctggcagtacctgagc
acactgtcccaggtcacagaagactatgtgcagactggagaacactga
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