Enhydra lutris kenyoni (northern sea otter): 111157025
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Entry
111157025 CDS
T05871
Name
(RefSeq) collagen alpha-1(XXV) chain isoform X1
KO
K24356
collagen type XXV alpha
Organism
elk
Enhydra lutris kenyoni (northern sea otter)
Pathway
elk04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
elk00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
111157025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
elk00536
]
111157025
Glycosaminoglycan binding proteins [BR:
elk00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111157025
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
LEA_1
Motif
Other DBs
NCBI-GeneID:
111157025
NCBI-ProteinID:
XP_022373936
UniProt:
A0A2Y9KK00
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MLVKKHAGKGGGREPGSEDPSPARQRCAWTVPPCTALSALLSVVAVMSCLYLGVKTNDLQ
ARIAVLESSKGDPSIHLLPDGLDQLKAMVQEKVEQLLAQKSYEQMAKIRIAREAPSECNC
PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRGLPGFPTVAALHSNQI
LTVKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQ
KGSVGEPGIPGVNGQKGDPGLPGAVGQNGIPGPKGEPGDQGEKGEAGEHGPKGDTGEKGD
PGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGER
GETGPPGRGERGEPGAPGPKGDRGEKGDSGALGPRGPPGQKGDQGATEIIDYNGNLHEAL
QGPPGPPGPQGLQGPKGEPGSPGIPGVDGEQGLKGSKGDMGDPGMPGEKGGIGLPGLPGA
NGMKGEKGDSGLPGPQGPSIIGPPGPPGPHGPPGPMGPHGLPGPKGEPGLNGVKGLKGEP
GQKGDRGPLGLPGASGLDGKPGSRGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLP
GFPGPRGEKGDVGEKGEKVTSPF
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgaaaaagcatgcagggaaaggtgggggtcgggagccaggctccgaggacccg
agccccgccaggcagcgttgtgcctggaccgtgcccccctgcaccgccctgtcggccctt
ctgtcggtggtggccgtgatgtcttgtctgtacctgggggtgaaaaccaacgacctccag
gcgaggatcgctgttctcgaatcctcaaaaggggacccttccatccatctgcttcccgat
ggcctggatcagctcaaagcaatggtgcaagagaaagtggagcaacttctggctcagaaa
tcctatgaacaaatggctaaaataagaattgcaagagaagcaccttcagagtgcaactgc
ccagcaggccctccagggaaacgaggtaaaaggggccgaagaggagaatctggtcctcct
ggtcaacctggtcctcagggccctccaggtccaaaaggtgataagggagaacaaggtgat
cagggacctcggggtctgccaggcttccccacagttgctgctctgcacagtaatcagatc
ctcaccgtcaagggtgaccaaggacaggctgggcctccaggacctccaggccctcctggc
ccaagagggcctccaggggacacagggaaagatggcccccgtggaatgccaggagtgccc
ggtgaaccagggaaaccaggagagcaaggcttgatgggtcctctggggcctccaggacaa
aagggttctgtgggagaacctggaattccaggggtgaatggtcaaaagggtgatcccggg
ttgcctggagcagtaggacaaaatggaataccagggccaaagggagaacctggagatcaa
ggcgaaaagggagaagctggagagcatggccccaaaggtgacacaggcgaaaagggtgac
cctgggtcatcagctgcaggaattaagggagaacctggagaatctggtcgcccaggacaa
aagggtgaaccagggcttcctgggcttcctggacttccggggataaagggagaaccaggt
ttcattggtcctcaaggagaaccaggcttaccagggttaccaggaacaaagggtgaacgt
ggggagacagggcctcctggaagaggtgagcgaggggagcctggagcccctggaccaaag
ggtgatcgtggagagaaaggggactctggagccctgggaccaaggggtccacctggtcaa
aagggagatcagggagccaccgagatcatagactacaatggcaatctccatgaagccttg
cagggcccccctggaccacctggacctcaaggactacaagggccaaagggagagccagga
tctccaggaatcccaggagttgatggagagcagggacttaaaggctctaagggagacatg
ggggacccaggtatgccaggtgaaaaaggaggaatcggacttcctggattaccgggtgcc
aatggaatgaaaggagaaaaaggagactccggattgccaggtcctcagggtccttctatc
ataggcccaccaggcccaccaggcccccatggcccaccaggccccatgggaccccatgga
cttcctggaccaaagggtgaaccagggttaaatggtgttaaaggattgaagggtgaacca
ggtcaaaagggtgacagaggaccccttggtcttccaggagcatctggcttagacggaaag
ccaggatcccggggtacagatggccctatgggaccccatggccccgcaggtcccaaagga
gaaagaggtgaaaaaggagctatgggagaacccggacccagaggaccctatggtctgcct
ggcttccctggtccacgaggcgagaagggtgatgtgggagaaaagggagaaaaggtgacc
tctccattctag
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