Enhydra lutris kenyoni (northern sea otter): 111157855
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Entry
111157855 CDS
T05871
Name
(RefSeq) collagen alpha-1(II) chain isoform X1
KO
K19719
collagen type II alpha
Organism
elk
Enhydra lutris kenyoni (northern sea otter)
Pathway
elk04151
PI3K-Akt signaling pathway
elk04510
Focal adhesion
elk04512
ECM-receptor interaction
elk04974
Protein digestion and absorption
elk05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
elk00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
111157855
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111157855
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111157855
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
111157855
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
111157855
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
elk00536
]
111157855
Glycosaminoglycan binding proteins [BR:
elk00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111157855
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
111157855
NCBI-ProteinID:
XP_022375256
UniProt:
A0A2Y9KNI7
LinkDB
All DBs
Position
Unknown
AA seq
1487 aa
AA seq
DB search
MIRFGAPQTLVLLTLLVAAVLRCQGQDVQKAGSCVQDGQRYNDKDVWKPEPCRICVCDTG
TVLCDDIICEDMKDCLSPETPFGECCPICSTDLTTAGGQPGPKGQKGEPGDIKDIVGPKG
PPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFA
AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMG
PRGPPGPPGKPGDDGEAGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG
EAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVG
PAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKG
SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQG
APGPAGEEGKRGARGEPGGAGPVGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAG
PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPG
VMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPG
PSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRG
LPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPG
KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGTAGARGAPGERGETGPPGPAGFAGPPG
ADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG
AAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPG
DDGPSGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPG
PVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGEAGAVGAPGAPGPPGSPGPAG
PTGKQGDRGEAGAQGPMGPAGPAGARGIPGPQGPRGDKGEAGEAGERGLKGHRGFTGLQG
LPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAG
PPGNPGPPGPPGPPGPGIDMSAFAGLGQREKGPDPLQYMRADQPAGDLRQHDAEVDATLK
SLNNQIESLRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETG
ETCVYPNPANVPKKNWWSSKGKDKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRL
LSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTVLKDGCTK
HTGKWGKTLIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcttcggggctccccagacgctggtgctgctgacgctgctcgtcgccgctgtc
cttcgatgtcagggccaggatgtccagaaggctggcagctgtgtgcaggatgggcagagg
tataatgataaggatgtgtggaagcctgagccctgccggatctgtgtctgtgacactggg
actgtcctctgcgacgacataatctgtgaagacatgaaagactgcctcagccccgagacc
cccttcggagagtgctgccccatctgctcaactgacctcaccactgccggtgggcaacca
ggaccaaagggacagaaaggagaacccggagacatcaaggatattgtaggacccaaagga
cctcctgggcctcagggacctgcaggtgaacaaggacccagaggtgatcgtggcgacaaa
ggtgaaaaaggtgcccctggacctcgtggcagagatggagagcctggaacccctggaaat
cctgggcccccaggtccccctggccccccgggtccccccggccttggtggaaacttcgct
gcccagatggctggaggattcgacgagaaggctggtggcgcccagatgggagtgatgcag
gggccgatgggccccatgggacctcggggacctccaggccctgctggtgctcctggacct
caaggatttcaaggcaaccctggtgaacctggggaacccggagtctccggtcccatgggt
ccccgtggtcctcctggcccccctggaaaacctggtgatgatggcgaagctggaaagcct
ggaaaatctggtgaaagaggtccccctggccctcagggtgctcgcggcttcccgggaacc
ccaggccttcctggtgtcaagggtcacagaggttacccaggtctagatggtgctaaggga
gaagctggggctccaggtgtgaagggagagagtggttcaccgggagagaatggctctcca
ggcccaatgggtccccgaggcctgcctggtgagcgaggacggaccggccccgctggtgct
gcaggtgcccgaggcaacgacggccaaccaggccctgcaggcccaccgggtcccgtgggt
cctgctggtggtcctggcttccctggtgctcctggggccaagggtgaagctggccccaca
ggtgctcgtggtcctgaaggtgctcaaggccctcgaggtgaacctggtactcctgggtcc
cccgggccggctggtgcctccggtaaccccggaacggatggaattcctggagccaaagga
tctgctggtgctcctggcattgctggtgcccctggcttccctgggccccgtgggccacct
ggtcctcaaggtgcgactggtcctctgggcccgaaaggtcagacgggcgagcctggtatt
gctggcttcaaaggtgaacaaggccccaagggagaacctggccctgctggcccccaagga
gcccctggtcctgctggtgaagaaggcaaacgaggagcccgtggagagcctggtggtgct
gggcccgtcggtccccctggagagagaggtgctcctggtaaccgtggtttcccgggtcag
gatggtctggcaggtccaaagggagcccctggagagcgagggcccagtggccttgctggt
cccaaaggagccaatggtgaccctggccgtcctggagagcccggccttcctggagcccgg
ggtctcactggtcgccctggtgatgctggtcctcaaggcaaagttggtccttctggagcc
cctggtgaagatggtcgccctggtcctccaggtcctcaaggcgctcgtgggcagcctggt
gtcatgggtttccctggccccaaaggtgccaacggtgagcctggcaaggctggtgagaag
ggactgcccggtgctcctggtctgagaggtcttcccggcaaagatggcgagacaggtgct
gcaggaccccccggacccgccggacctgctggtgaacgaggcgagcagggtgctcctggg
ccatctgggttccagggacttcctggccctcctggtcccccaggtgaaggtggaaaacca
ggtgaccagggtgttcccggtgaagctggagcccccggcctcgtgggtcccaggggcgaa
agaggtttcccaggcgaacgtggctctcccggggcccagggcctccagggcccccgtggc
ctccccggcactcctggcacagatggtcccaaaggtgcatctggcccagctggcccccct
ggggctcagggccctccaggtctgcaagggatgcccggtgagaggggagcagctggcatt
gctgggcccaagggagacaggggtgacgttggtgagaaaggccctgagggagcccccggg
aaggacggtggacgaggcctgactggtcccattggcccccctggccccgctggtgccaat
ggtgagaagggagaagttggacctcccggtcctgcaggaaccgctggtgctcgcggtgcc
ccgggtgaacgtggagagactggaccccccgggcccgctggattcgcaggtcctcctggt
gctgatggccagccaggggccaagggcgagcaaggagaggccggccagaaaggtgatgct
ggtgccccgggtcctcagggcccctctggagctcctgggcctcagggtcctactggtgtg
actggtcctaaaggagcccgaggtgctcaaggtcccccgggagccaccggattccccgga
gctgctggccgcgtcggacccccaggctccaatggaaaccctgggcctcctggtccccct
ggtccttctggaaaagatggtcccaaaggtgctcgaggagacagtggcccccctggccgt
gccggtgaccctggtctccaaggtcctgctggaccccctggcgagaagggagagcccgga
gatgacggtccctctggtcctgatggtcctccaggtccccaaggtctggctggtcagagg
ggtatcgttggtctacctgggcagcgtggtgagagaggattcccaggcttgcctgggcca
tcgggtgagcctggcaagcagggagctcctggtgcatctggtgaccgaggtccccccggc
cccgtgggtcctcctggcttgaccggtcctgccggtgaacctggacgagagggaagccct
ggtgctgacggcccccctggcagagatggcgcggctggagtcaagggagatcgtggtgag
gccggtgcagtgggtgcccctggagctcccgggccccctggctctcctggccccgctggc
ccaactggaaagcagggagaccgaggagaagctggtgcacaaggccccatgggtcccgca
ggaccagctggagcccgaggaatcccaggtcctcaaggtccccgaggtgacaaaggagaa
gctggagaggctggcgagaggggactgaagggacaccgtggcttcactggtctgcagggt
ctgcctggcccccccggtccttctggagaccaaggtgcttctggtcctgctggtccttct
ggtcctagaggtcctcctggccctgttggtccctctggcaaagatggtgctaatggaatc
cccggccccatcgggccccctggcccccgtggacggtcaggcgaaactggccccgctggt
cctcctggaaaccctgggccccctggtcctccaggtccccccggccccggcatcgacatg
tctgcctttgctggccttggccagagagagaagggccctgaccccctgcagtacatgcgg
gccgaccagccagctggtgacctgagacagcacgacgctgaggtggatgccacgctcaag
tccctcaacaaccagatcgagagcctgcgcagccccgagggctcacgcaagaaccctgct
cgcacctgccgggacctgaaactctgtcaccctgaatggaagagcggagactactggatt
gaccccaaccagggctgcaccttggacgccatgaaggttttctgcaacatggagactggc
gagacctgcgtctaccccaacccagcgaacgttcccaagaagaactggtggagcagcaag
ggcaaggacaagaaacacatctggtttggagaaaccatcaatggcggcttccatttcagc
tatggtgacgacaacctggctcccaacactgccaacgtccagatgacgttcctacgcttg
ctgtccaccgagggctcccagaacatcacctaccactgcaagaacagcattgcctacctg
gacgaggcagccggcaacctcaagaaggccctgctcatccagggctccaatgacgtggag
atccgggctgagggcaacagccgcttcacatacactgtcctgaaggatggctgcacgaaa
cacaccggtaagtggggcaagactctgatcgagtaccggtcacagaagacctcacgtctc
cccatcattgacattgcgcccatggacataggagggcccgagcaggaatttggtgtggac
ataggacctgtctgcttcttgtaa
DBGET
integrated database retrieval system
