Enhydra lutris kenyoni (northern sea otter): 111158678
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Entry
111158678 CDS
T05871
Name
(RefSeq) protein SCAF8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
elk
Enhydra lutris kenyoni (northern sea otter)
Brite
KEGG Orthology (KO) [BR:
elk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
elk03021
]
111158678
03041 Spliceosome [BR:
elk03041
]
111158678
Transcription machinery [BR:
elk03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111158678
Spliceosome [BR:
elk03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
111158678
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
111158678
NCBI-ProteinID:
XP_022376585
UniProt:
A0A2Y9L519
LinkDB
All DBs
Position
Unknown
AA seq
1388 aa
AA seq
DB search
MVSARARAVQSPGGALAGAADLRAARPDWRPPYWMPQPLLPALPPPSSLCAAGSCGPSGG
EVKQESDKGRRRRGWRVGRVSRRRPSSRPCRRPRLALPTQCSGRRLFRRRARGLRTDNME
AVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPG
LYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNV
FKSEIIQPLLDMAAGIPPPVVTPVLASTTAAMSNTPGTPVTPVTPANVVQGLPDPWVSQI
TNTDTLAAVAQILQSPQGQQLQQLIQTLQLQQQKPQPSILQALDAGLVVQLQALTAQLTA
AAAAANTLNPLEQGVAFNKKLMDRFDFGEDSEHSEEPKKEISASQLSHVSESVNNSIFHQ
IAEQLQQQNLEHLRQQLLEQQQPQKATPQDSQEGTFGSEHSASPSQGSSQQHFLEPEANL
DDSIDIQQQDMDIDEGQDGVEEEIFEQEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRSGS
RKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLWVG
QVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFRALQKLSSGSYKIGSK
VIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVDDLEGFAEGGMIDQETVNTEWETV
KSSEPVKETVQTTQSPTPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPAVSLVPPAFPVS
MPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPTIPPVVPTSLVQPPLSM
TPETVKDVGFGGLVLPGGSVASNLATSTLPAGNVFNPPTKQGEPEEKVPHLIDHQIPSGE
NTRSVIPNDIPSSPAMLGGQPPNVTSNSGILGVQRPNVSSNSEIIGIRPSNVSSSSGIIG
AQPPNILNNSGILGLQPPTVSSSSGLLGVLPPNIPNNSGLIGVQPPNVPNAAGLLGTQPP
AGPQNLPPLNLSNQRMPAMPMLDIRPGLIPQTPGPRFPLIQPGIPPQRGIPPPSVLDSPL
HPPPRGPFPPGDIFSQPERPFLVPGRQSVDNVTNPEKRIPLGNDNIQQEGDRDYRFPPIE
ARESISRPPPVDVREVVGRPIDPREGPGRPPLDGRDHFGRPPVDIRENLVRPGIDHLGRR
DHFGFNPEKPWGHRDFDEREHRVLPVYGGPKGLHEERGRFRSGSYRFDPRSGPWNRGFGQ
EVHRDFDDRRRPWERQRDRDDRDFDFCREINGNRLGRDRIQNTWVPPPHPRVFDFFEGAT
SQRKGDNVPQVNGENTERHAQPPPLPVQNDPELYEKLTSSSEINKEKSDTVADIESEPVV
ESTETEGT
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atggtttccgcgcgggcccgcgcggtccagtcaccagggggcgcgctggccggcgccgcg
gatctccgagctgcgcggcccgactggcgtccgccatattggatgccgcagccgctgctg
ccagcgcttcctcctccgtcttcgctgtgcgctgctggttcctgcggcccgagcggcggg
gaggtgaaacaggagtctgacaaaggaagaagaaggagggggtggagagtcggccgggtc
tcccgccggcgcccctcctcgcggccgtgccgccgcccccgtctcgctctccccacccag
tgcagtggccgccgcctcttccgccgccgggctcggggcctccgcaccgacaacatggag
gctgtgaaaaccttcaatagcgagttgtattccctgaacgactacaaaccacccatttct
aaagcgaaaatgacccaaattactaaggcagccatcaaagctattaagttctataaacat
gtggtacagagcgttgagaaattcattcagaaatgtaaaccagaatacaaggtacctgga
ctttatgttattgactccattgtacgacaatctcgacatcagtttggtcaagaaaaggat
gtgtttgcacccagatttagtaataacatcattagcactttccagaatttatatcgttgc
cctggggatgacaagagtaaaatagtgagagtattaaacttatggcagaagaataatgtg
tttaagagtgagattattcagcctcttttggacatggcagcagggattcctcccccggtt
gtcacacctgttttggccagtactactgctgctatgagcaacaccccaggaactcctgtg
acacctgttactccagccaatgtggtccagggtctgccggatccgtgggtgtctcagata
acaaacacagatacacttgcagcagtagctcaaatcttacaaagtcctcaaggccaacag
cttcagcagttaatacaaactttacagctacagcagcagaagcctcagccttcgattctg
caggccctggacgctggtcttgttgtgcagttgcaggcgctcacagcacagctcaccgcg
gcagctgcggcagctaacaccctgaaccccttggaacagggagtggctttcaacaagaag
ttgatggataggtttgattttggggaagattctgagcatagtgaagaacccaaaaaggaa
atttcagcctctcaactttctcatgtttcagaatctgtgaacaattccatttttcatcag
atagctgaacaactacagcagcaaaaccttgaacatctcagacagcagctcctagaacag
caacagcctcaaaaggcaacccctcaggatagtcaggagggaacatttggatcagagcat
tctgcctcaccatcacaagggagcagtcagcagcacttccttgaacctgaagcaaatttg
gatgattctatagatattcagcaacaggatatggatattgatgaagggcaagatggagtg
gaagaggagatctttgaacaagaagcaaagaaagtggctgttcgctcaagatcaagaaca
cattcacgatctcgttcaagatcacccagaaaacgaaggtctcggtcacggtctggttct
cgaaaacgtaaacacagaaagcgatcacgctcacgctcaagagaaagaaagaggaagtca
tcacgttcatactcaagtgaaaggagagcgagagaaagggagaaagaacgacagaagaag
ggattacctccaattagatctaaaacattaagtgtatgtagtactactttgtgggttggt
caggtggataagaaggcgacccagcaagatttaaccaatctgtttgaagagtttggacaa
attgaatccattaatatgattcctcccaggggctgtgcttacgtctgcatggttcatcga
caagatgcttttcgggctcttcagaaacttagttccggatcatataaaattgggtccaag
gtcattaagattgcttgggctttaaacaaaggtgtaaaaacagaatataaacaattctgg
gatgtggatcttggagttacatatataccatgggagaaagttaaagtggatgacttggaa
ggttttgcagaaggaggcatgattgaccaggaaactgtaaatactgagtgggaaactgtg
aaaagctcagaacccgttaaagagacggtccagacaactcagagcccaactccagttgaa
aaagagacagtggtcacaacccaggcagaggtttttcctccacctgttgctatgttacag
attccggtagctccagcagtgcctgcagttagtctagtcccaccagcatttcctgtctca
atgccagttcctcctcctggatttagtccaatccctccaccaccttttctgcgagcgagt
ttcaacccttcacagccacctcctggtttcatgccacctccagttccaccacctgttgta
ccaccacccaccattccaccagtagtaccaacatctttagtgcagccgccattatccatg
actccagaaactgtgaaagatgttggatttggtggtcttgttttaccgggtggttctgtt
gccagcaatcttgctacttccactctgccagctggaaatgtttttaatcctccaactaaa
caaggagagcctgaagaaaaagtacctcatcttatagaccaccagattccttctggcgaa
aataccagatcagtgattccaaatgatattccaagtagccctgcaatgttaggaggacag
ccaccaaatgtgacaagcaattctggaattctgggagtccaaagaccaaatgtatcgagt
aattctgaaattattggaatccgaccatctaatgtttctagtagttctgggattattgga
gcccagccaccaaatattctaaataactctggaattttgggactacagccaccaactgtg
tcaagtagttctggacttttgggagtgcttcccccaaatatccctaataattctggactt
ataggagtacagccaccaaatgttccaaatgccgctggacttttgggaacacaaccacca
gctgggcctcaaaacttaccccctttaaatctctctaatcaaaggatgcctgcaatgcca
atgttagacattcgtccaggactaataccacagacacctggaccaagattccctttaata
cagcctggaattccaccccaacggggaatccctcccccatcggtactggattcacctctt
catccaccaccccgtggtccttttcctccaggagatatttttagtcagccagaaagacct
tttctagttcctggaagacaaagtgtagacaatgttactaatccagaaaaaaggatacca
cttgggaatgataacattcaacaggaaggagatagagattaccggtttcctcccattgaa
gccagggaaagcattagtagaccccccccggtggatgttagggaagttgttggacggcct
atagatccaagagaaggtcctggaaggcctccattagatggtagggatcattttggaaga
cctccagtcgatattagagagaatcttgtgaggccaggcatagatcatcttggtcgaaga
gaccactttggctttaatccagagaagccctgggggcatagagattttgatgagagagaa
catcgggttctacctgtctatggtggtccaaaaggcttacatgaagaaagaggtagattt
cggtctggaagctatcgatttgatcctagaagtggtccttggaacagaggatttggacaa
gaagttcacagagattttgatgaccgcagaagaccctgggagaggcaaagggatagggat
gacagagattttgatttctgccgagaaattaatggaaaccgtcttggacgagatagaatt
caaaacacctgggtcccccctcctcatcctcgggtttttgatttttttgaaggggccact
tctcaacgaaaaggtgataacgtgcctcaggttaatggtgaaaatactgagagacatgcc
cagccaccacctttaccagtacagaatgatcctgaactttatgaaaaactgacatcttca
agtgaaataaacaaggagaagagtgacacagttgctgatatagaaagtgaaccagtggta
gaaagcacagaaactgaggggacataa
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