Enhydra lutris kenyoni (northern sea otter): 111158711
Help
Entry
111158711 CDS
T05871
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
elk
Enhydra lutris kenyoni (northern sea otter)
Pathway
elk04120
Ubiquitin mediated proteolysis
elk04137
Mitophagy - animal
elk04141
Protein processing in endoplasmic reticulum
elk05012
Parkinson disease
elk05014
Amyotrophic lateral sclerosis
elk05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
elk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111158711
04120 Ubiquitin mediated proteolysis
111158711
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
111158711
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
111158711
05014 Amyotrophic lateral sclerosis
111158711
05022 Pathways of neurodegeneration - multiple diseases
111158711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
elk04131
]
111158711
04121 Ubiquitin system [BR:
elk04121
]
111158711
03029 Mitochondrial biogenesis [BR:
elk03029
]
111158711
Enzymes [BR:
elk01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
111158711
Membrane trafficking [BR:
elk04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
111158711
Aggrephagy
Other aggrephagy associated proteins
111158711
Xenophagy
Other xenophagy associated proteins
111158711
Ubiquitin system [BR:
elk04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
111158711
Mitochondrial biogenesis [BR:
elk03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
111158711
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
IBR_2
IBR_1
IBR
Motif
Other DBs
NCBI-GeneID:
111158711
NCBI-ProteinID:
XP_022376638
UniProt:
A0A2Y9KU11
LinkDB
All DBs
Position
Unknown
AA seq
396 aa
AA seq
DB search
MVLRPWREDQGGAATGQEGPQNTTVGSEREPESLTRVDLSSSVLPSHSGGLAVILNSDDA
RTLPVGRPAGRRTYNSFYVYCKGPCQRVQPGKLRVQCSTCQQATLTLAQGPSCWDDVLIP
NRMTGKCQSAHCSGTTAEFFFKCGAHPTSDKDTSVALNLITTNSRDITCITCTDVRSPVL
VFQCNHRHVICLDCFYLYCVTRLNDRQFIPDLQLGYSLPCVAGCPNSLIKELHHFRILGE
EQYNRYQQYGAEECVLQMGGVLCPSPGCGAGLLPEPGMRKVTCEGGSGLGCGFVFCRDCK
EEYHEGECGTLFEASGAVTQAYRVDQKAAEQARWEEASKDTIKKTTKPCPRCHVPVEKNG
GCMHMKCPQPQCGLEWCWACSCEWNRACMGDHWFDV
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgagaccctggagggaagaccaaggaggggcggccactggacaggaaggccca
caaaacaccacggtgggctcggagagagagcctgagagcttgacacgcgtggacctcagc
agctccgtcctcccgtcccactcggggggtctggccgtgatcctgaacagtgacgacgcc
aggaccctgccagtcggaaggccagcaggtagacgaacctacaacagcttttatgtctat
tgcaaaggcccctgtcagagagtacagccgggaaaactccgggtacagtgcagcacctgc
caacaggcaacgctcaccttggcccagggtccgtcttgctgggatgatgtcttaatccca
aaccggatgaccggcaaatgtcagtctgcacactgctctgggactacagccgaatttttc
tttaaatgtggagcacacccgacctccgacaaggacacgtcagtagctttgaacctgatc
acaacaaacagtcgagacatcacctgcatcacctgcaccgacgtcaggagccctgtcctg
gttttccagtgcaaccaccgtcacgtgatttgcttagattgtttctacttatattgtgtg
acaagactgaatgaccggcagttcatccctgaccttcagctcggctactctctgccttgt
gtggctggctgccccaactccttgattaaagagctccatcacttcaggattcttggagaa
gagcagtacaaccggtaccagcaatatggtgctgaagagtgtgtgctacagatgggggga
gtgctgtgccctagccctggctgtggagcagggctgcttcctgagccgggcatgaggaag
gtcacttgtgaagggggcagcggcctgggctgtgggttcgtcttctgccgggactgtaag
gaggagtaccatgaaggtgaatgcggcaccctctttgaagcctcaggagcagttactcag
gcttaccgagttgaccagaaggctgcggagcaagctcggtgggaagaggcctccaaagac
acgatcaagaaaaccaccaagccctgtccccgctgccatgtgcccgttgagaaaaatgga
ggctgcatgcacatgaagtgtccgcagccgcagtgcgggctggagtggtgctgggcctgc
agctgcgagtggaaccgcgcctgcatgggggaccactggttcgacgtgtag
DBGET
integrated database retrieval system
