Enhydra lutris kenyoni (northern sea otter): 111158932
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Entry
111158932 CDS
T05871
Name
(RefSeq) CCR4-NOT transcription complex subunit 6 isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
elk
Enhydra lutris kenyoni (northern sea otter)
Pathway
elk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
elk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111158932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elk03019
]
111158932
Enzymes [BR:
elk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
111158932
Messenger RNA biogenesis [BR:
elk03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111158932
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111158932
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
111158932
NCBI-ProteinID:
XP_022376980
UniProt:
A0A2Y9KTA0
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MPKEKYEPPDPRRMYTIMSSEEAANGKKSHWAELEISGKVRSLSSSLWSLTHLTALHLSD
NSLSRIPSDIAKLHNLVYLDLSSNKIRSLPAELGNMVSLRELHLNNNLLRVLPFELGKLF
QLQTLGLKGNPLTQDILNLYLEPDGTRRLLNYLLDNLAGTAKRISTEQPPPRSWIMLQEP
DRTRPTALFSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIISLQE
VETEQYYSFFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTV
EFNQLAMANSEGSEAMLNRVMTKDNIGVAVLLELRKELMEMSSGKPHLGAEKQLILVANA
HMHWDPEYSDVKLVQTMMFLSEVKNIIDKASRNLQSSVLGEFGTIPLVLCADLNSLPDSG
VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYESGLMPYT
NYTFDFKGIIDYIFYSKPQLNTLGILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLEL
LLPFLPQVNGIHLPGRR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagaaaaatacgagccccctgaccctaggaggatgtacacaattatgtcctct
gaggaagcagcaaatggaaagaaatcacattgggcagagcttgaaataagtggaaaagta
agaagcttaagctcatcgttgtggtcactaactcacttgacagctttgcatctgagtgac
aattccctgtcccgcattccttcagacattgccaagcttcacaatctggtgtatctggac
ctgtcctctaataaaatccggagtttaccggcagaactcggaaacatggtatcactcagg
gaactccatttaaataacaacctgttacgagttctaccttttgagctgggaaaactgttt
cagttgcagactttaggcctgaaaggaaatccacttacccaggatatattgaacctctat
ctggaaccagatggaacaagaaggctactgaactatttgcttgataatttggcaggtact
gcaaaaagaatttcaacagaacagccacctccaagatcttggattatgttgcaagaacca
gacagaacaaggccaactgccttgttttctgtcatgtgctataatgttctttgtgataaa
tatgcgacccggcagttatacggctactgtccatcttgggcactaaattgggactacagg
aaaaaggctattattcaagaaattttgagctgcaatgctgatatcataagtcttcaggag
gttgaaacagaacagtattacagtttttttctggtagaactgaaagaacgtggctataat
ggattctttagtcctaaatctagagctaggacaatgtcagaacaagaaagaaaacatgtc
gatggctgtgcaatattcttcaagacagaaaaatttactttggttcagaaacacactgtt
gaatttaatcagctagcaatggcaaattcggaagggtctgaagctatgctgaacagagtc
atgacaaaagataacattggagttgcagtactgctagaacttcgaaaggaattgatggaa
atgtcatctggaaagccacatcttggagcagaaaaacaacttattcttgtggctaatgct
catatgcattgggaccctgaatactctgatgtgaagttggttcaaactatgatgttcctc
tcagaagtgaagaacattattgataaagcctcacgaaacctccagtccagtgtattggga
gaatttggaactattccactggtgttatgtgcagatcttaattctttgccagattctggt
gttgtagaatatttaagcaccggcggagtagaaacaaatcataaagactttaaggaactg
agatacaatgaaagtcttacaaacttcagctgtaatgggaaaaatgggacaaccaatgga
aggatcacacatggtttcaagttgaagagtgcctatgagagtggcctgatgccttataca
aattacacgttcgatttcaagggtataattgactacatcttctattcgaaacctcagctg
aacactttaggcatcctgggacctctggaccaccattggctcgttgagaataatatcagc
ggctgcccacacccactcatcccctccgaccacttctcactttttgcacaactggagctc
ttactgcctttcctgccccaagtgaacggcattcaccttcctggcaggaggtag
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