Enhydra lutris kenyoni (northern sea otter): 111158990
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Entry
111158990 CDS
T05871
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
elk
Enhydra lutris kenyoni (northern sea otter)
Pathway
elk05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
elk00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
111158990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elk03019
]
111158990
04121 Ubiquitin system [BR:
elk04121
]
111158990
Enzymes [BR:
elk01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111158990
Messenger RNA biogenesis [BR:
elk03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111158990
Ubiquitin system [BR:
elk04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111158990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-C3HC4
zf-RING_5
COG5_N
Motif
Other DBs
NCBI-GeneID:
111158990
NCBI-ProteinID:
XP_022377054
UniProt:
A0A2Y9L0C3
LinkDB
All DBs
Position
Unknown
AA seq
870 aa
AA seq
DB search
MASFPETDFQICLLCKEMCGSPAPLSSSSSASSSSSQTSTSSGGGGGGPGAAARRLHVLP
CLHAFCRPCLEAHRLPAAGGSAPGEPLKLRCPVCDQKVVLAEAAGMDALPSSAFLLSNLL
DAVVATADEPPPKNGRAGAPAGAGGHSNHRHHAHHAHPRASASAPAPLPPAPPPPAPSRS
APGGPAASPSALLLRRPHGCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTKDHYIE
RGPPGPAAAAAAAQQLGLGPPFPGAPFSILSVFPERLGFCQHHDDEVLHLYCDTCSVPIC
RECTMGRHGGHSFIYLQEALQDSRALTIQLLADAQQGRQAIQLSIEQAQTVAEQVEMKAK
VVQSEVKAVTARHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQSLNKLESTISAV
QQVLEEGRALDVLLARDRMLAQVQELKTVRSFLQPQEDDRVMFTPPDQALYLAIKSFGFV
SSGAFAPLTKATGDGLKRALQGKVASFTVIGYDHDGEPRLSGGDLMSAVVLGPDGNLFGA
EVSDQQNGTYVVSYRPQLEGEHLVSVTMCNQHIENSPFKVVVKSGRSYVGIGLPGLSFGS
EGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQFDRPAG
VACDASRRIVVADKDNHRIQVFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSD
TRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDFNNHRLLVIHPDC
QSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGSFLCKFGAQGSGF
GQMDRPSGIAVTPDGMIVVVDFGNNRILIF
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttccccgagaccgacttccagatctgcctgttgtgcaaggagatgtgcggc
tccccggcgccgctctcctccagctcgtctgcgtcgtcgtcgtcctcgcagacgtccacg
tcgtctggtggtggcggcgggggtccgggggccgcggcgcgccgcctgcacgtcctgccc
tgcctgcatgctttctgccgcccgtgcctcgaagcgcaccggctgccggcggcgggcggc
agcgcgccaggagagccactcaagctgcgctgtcccgtgtgtgaccagaaagtagtactg
gccgaggcggcgggcatggatgcgcttccctcgtctgccttcctgctcagcaacctgctc
gacgccgtggtggccactgcagacgagccgccgcccaagaacgggcgtgccggagccccg
gcgggcgcgggcggccacagcaaccaccggcaccacgcgcaccacgcgcacccgcgcgcg
tccgcctcggccccggcgccactcccgcccgcgccgccaccacccgcgccttcccgctct
gcgcccggtggtcccgctgcctctccttccgcgctactgttgcgtcggcctcacggctgc
agctcctgcgacgagggcaacgcggcctcgtcgcgctgcctggactgccaggagcacctg
tgcgacaactgcgtccgcgcgcatcagcgcgtgcgcctcactaaggaccactacatcgag
cggggcccgccaggtcccgccgccgccgccgccgcggcgcagcagctcggtctcggaccg
cccttccctggcgcgcccttctccatcctgtccgtgttccccgagcgcctcggcttctgc
cagcaccacgacgatgaggtgctgcatctgtactgtgacacctgttcggtgcccatctgc
cgtgagtgtacgatgggccggcatgggggccacagcttcatctacctccaggaggcgctg
caggactcgcgggcacttaccatccagctgctggccgacgcgcagcagggccgccaggca
atccagctgagcatcgagcaggcccagacggtggcagagcaggtggagatgaaggcaaag
gtggtacagtcggaggtcaaagctgtgacggcaaggcacaagaaggccctggaggagcgg
gagtgcgagctgctgtggaaggtggagaagatccgccaggtgaaagccaagtccctgtac
ctgcaggtggagaagctgcggcagagcctcaacaagctggagagcaccatcagtgccgtc
cagcaggtgctggaggagggccgggcgctggatgtcctgctggcccgggaccgcatgctg
gcccaggtgcaggagctgaagaccgtgcgcagcttcctgcagccccaggaagacgaccgt
gtcatgttcacaccccctgaccaggccctgtacctcgccatcaagtcattcggcttcgtt
agcagtggggccttcgcgccactcaccaaagccacgggggatggcctcaagcgggccctc
cagggtaaggtggcctccttcacagttattggctacgaccatgatggggagcctcgcctc
tctgggggcgacctgatgtcagccgtggtcttgggccctgatggcaacctgtttggtgcc
gaggtgagtgaccagcagaacgggacctatgtggtgagttaccggccgcagctggagggc
gagcacctggtgtcggtcaccatgtgcaatcagcacatcgagaacagccccttcaaggtg
gtggtcaagtcaggccgcagctacgtgggcatcgggctcccgggcctgagctttggcagc
gagggcgacagtgatggcaagctctgccgcccctggggcgtgagtgtggacaaggagggc
tacatcgtcgtggccgaccgcagcaacaaccgcatccaggtgttcaagccatgtggcacc
ttccaccacaaatttggcaccctgggctcccggcccgggcagttcgaccggccagctggc
gtggcctgcgatgcctcccgcaggatcgtggtggctgacaaggacaatcatcgcatccag
gtcttcacgtttgagggccagttcctgctcaagttcggcgagaagggaaccaaaaatggg
cagttcaactacccttgggacgtggcggtgaattctgagggcaagatcctggtctctgac
acccgcaaccaccggatccagctgttcgggccggacggtgtcttcctgaataagtacggc
ttcgagggggctctctggaagcactttgactccccccgtggtgtggccttcaaccacgag
ggccacttggtggtcaccgacttcaacaaccaccggctcctggtcatccaccctgactgc
cagtccgcgcgcttcctgggctccgagggcacgggcaatgggcagttcctgcgcccacag
ggtgtggccgtggaccaggaggggcgcatcattgtggccgactccaggaaccaccgcgtg
cagatgttcgagtccaatggcagcttcctgtgcaagtttggcgcccagggcagtggcttt
gggcagatggaccgcccgtccggcatcgcagtcacccccgacgggatgattgtggtggtg
gactttggcaacaatcggatcctcatcttctga
DBGET
integrated database retrieval system
