KEGG   Enhydra lutris kenyoni (northern sea otter): 111160446
Entry
111160446         CDS       T05871                                 
Name
(RefSeq) eukaryotic initiation factor 4A-III
  KO
K13025  ATP-dependent RNA helicase [EC:5.6.2.7]
Organism
elk  Enhydra lutris kenyoni (northern sea otter)
Pathway
elk03013  Nucleocytoplasmic transport
elk03015  mRNA surveillance pathway
elk03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:elk00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111160446
  09122 Translation
   03013 Nucleocytoplasmic transport
    111160446
   03015 mRNA surveillance pathway
    111160446
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:elk03019]
    111160446
   03041 Spliceosome [BR:elk03041]
    111160446
   03009 Ribosome biogenesis [BR:elk03009]
    111160446
   03012 Translation factors [BR:elk03012]
    111160446
Enzymes [BR:elk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     111160446
Messenger RNA biogenesis [BR:elk03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     111160446
   mRNA cycle factors
    Stress granule specific factors
     111160446
Spliceosome [BR:elk03041]
 Complex C
  Other components
   EJC/TREX
    111160446
Ribosome biogenesis [BR:elk03009]
 Eukaryotic type
  90S particles
   Helicases
    111160446
Translation factors [BR:elk03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    111160446
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 Cas3-like_C_2 AAA_30 AAA_22 Flavi_DEAD
Other DBs
NCBI-GeneID: 111160446
NCBI-ProteinID: XP_022379288
UniProt: A0A2Y9L1Q2
LinkDB
Position
Unknown
AA seq 411 aa
MAATATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq 1236 nt   +upstreamnt  +downstreamnt
atggcggccacggccacgatggcgacctcggggtcggcgcggaagcggctgctcaaagag
gaagacatgaccaaagtggaattcgagaccagcgaggaggtggacgtgacgcccacgttc
gacaccatgggcctgcgggaggaccttctgcgcggcatctacgcctacggttttgagaaa
ccgtcagccatccagcagcgagccatcaagcagataattaaagggagagacgttattgct
caatcgcagtctggcacaggcaaaaccgccaccttcagcatttctgtcctccagtgtttg
gatatccaggttcgagaaacccaggctttgatcttggccccaacgagagagttagccgtg
cagatccagaagggcctgctcgctctgggggactacatgaacgtgcagtgccacgcctgc
attgggggcaccaacgtgggggaggacatcaggaagctggactacgggcagcacgttgtg
gccggcacacccgggcgtgtctttgacatgatccggcgcaggagtttgaggacgcgtgcc
atcaagatgttggtgttggacgaggcggatgagatgctgaataaaggtttcaaagagcag
atttacgacgtgtacaggtacttgcccccggccacgcaggtggtgctcatcagcgccacg
ctgcctcacgagatcctggagatgaccaacaagttcatgaccgaccccatccgcatcttg
gtgaagcgtgatgagttgactctagaaggcatcaagcagttttttgtggcggtggagagg
gaagagtggaaatttgataccctgtgtgacctgtacgacacgctgaccataactcaggcg
gtcatcttctgtaacaccaaaaggaaggttgactggctgacggagaagatgagggaagcc
aacttcacggtgtcgtccatgcatggggacatgccgcagaaggagcgcgagtccatcatg
aaggagttccggtccggcgccagtcgggtgctcatctccacggacgtgtgggcccggggg
ctggatgtcccgcaggtgtccctcatcatcaactacgacctgcccaacaacagagagctg
tacatccacagaatcgggcggtcgggccgctacggccgcaagggggtggccatcaacttc
gtgaagaacgacgacatccgcatcctgagggacatcgagcagtactactccacccagatc
gatgagatgcccatgaacgtggctgacctgatctga

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