Enhydra lutris kenyoni (northern sea otter): 111160874
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Entry
111160874 CDS
T05871
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
elk
Enhydra lutris kenyoni (northern sea otter)
Pathway
elk03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
elk00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111160874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elk03019
]
111160874
Messenger RNA biogenesis [BR:
elk03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
111160874
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
ASA1
Beta-prop_WDR90_POC16_2nd
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
CFAP251_N
Beta-prop_EIPR1
Collagen
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_Vps41
eIF2A
WD40_RFWD3
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
111160874
NCBI-ProteinID:
XP_022379969
UniProt:
A0A2Y9L8L5
LinkDB
All DBs
Position
Unknown
AA seq
1336 aa
AA seq
DB search
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMGKDESNEIEMTIPGLDWGMEE
VMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPAPNEVLNDRKEDIKLEEKKKTQAE
IEQEMATLQYTNPQLLEQLKIERLAQKQAEQIQPPPSSGTPLLGPQPFPGQGPMSQIPQG
FQQPHPSQQMPMNMAQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGGGGPQGFMGPQGPQG
PPQGLPRPQDMHGPQGMQRHPGPHGPLGPQGPPGPQGNSGPQGHMGPQGPPGPQGHIGPQ
GPPGPQGHLGPQGPPGTQGMQGPPGPRGMQGPPHPHGIQGGPGSQGIQGPVSQGPLMGLN
PRGMQGPPGPRENQGPAPQGMMMGHPPQEMRGPHPPSGLLGHGPQEMRGPQEIRGMQGPP
AQGSMLGPPQELRGPPGSQGQQGPPQGSLGPPPQGGMQGPPGPQGQQNPARGPHPSQGPI
PFQQQKTALLGDGPRAPFNQEGQNAGPPPLIPGLGQQGAQGRIPPLNPGQGPGPNKGDSR
GPPNHHMGPMSERRHEQSSGPEHGPERGPFRGSQDCRGPPDRRGPHPDFPDDFSRPDDFH
PDKRFGHRLREFEGRGGPLPQEEKWRRGGPGPPFPPDHREFSEGDGRGAARGPPGAWEGR
RPGDERFPRDPEDPRFRGRREESFRRGAPPRHEGRAPPRGRDSFPGPEDFGPEENFDPSD
EAARGRDLRGRGRGTPRGGRKGLLPTPDEFPRFEGGRKPDSWDGNREPGPGHEHFRDAPR
PDHPPHDGHSPASRERSSSLQGMDMASLPPRKRPWHDGPGTSEHREMEAPGGPSEDRGGK
GRGGPGPSQRVPKSGRSSSLDGDHHDSYHRDEPFGGPPGSGTPSRGGRSGSNWGRGSNMN
SGPPRRGTSRGGGRGR
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atggctacagaaattggttctcctcctcgttttttccatatgccaaggttccaacaccaa
gcacctcgacaactattttataagcgacctgattttgcgcagcagcaagcaatgcaacag
ctcacctttgatggaaaacggatgagaaaagcagtaaaccgaaaaaccatagactataat
ccgtctgtaattaagtatttggagaatagaatatggcaaagagaccagagagatatgcgg
gcaattcagcctgatgcaggttattataatgatctggtcccacctatagggatgttgaat
aatcctatgaatgcagtaacaacaaaatttgttcgaacatcaacaaataaagtaaagtgt
ccggtatttgttgttaggtggactccagaaggaagacgattggtcactggcgcttctagt
ggagaattcaccttgtggaatggactcaccttcaattttgaaacaatattacaggctcat
gatagccccgtgagggccatgacttggtcacataatgacatgtggatgttgacagcagac
catggaggatatgtgaaatattggcagtcgaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgatgacggcactgttagaatctgggactttcttcgttgccatgaggaaagaattctc
cgagggcatggtgcagatgtgaaatgtgtagactggcatccaacaaaagggttagttgtt
tcaggaagtaaagatagtcaacagccaatcaagttctgggatcccaagactgggcagagt
cttgcaacacttcatgcccataaaaacacagtaatggaagtgaaattaaatctcaatggc
aattggctactcactgcatcacgtgaccacctctgtaaactttttgatatccgaaacctg
aaagaagagcttcaagtcttccgaggtcataagaaagaagccacagctgtggcctggcat
cctgttcatgaaggactttttgccagtggagggtccgatggctctttgttattctggcat
gtgggggtagagaaggaagtgggtgggatggagatggcccacgaaggaatgatctggagt
ctggcttggcatcctcttggacatattctctgctcaggttcaaatgaccatactagcaaa
ttctggacccgaaaccggccaggtgataaaatgcgagatcgatataatctcaacctattg
cctggaatgtctgaagatggagtagaatatgatgaccttgaacctaatagcctggcagta
attccaggaatgggaataccagaacaactaaaattagctatggaacaagagcagatgggg
aaagatgaatcaaatgaaattgaaatgacgattccaggtttggactggggaatggaggag
gtgatgcaaaaggatcagaaaaaagttcctcagaagaaagttccttatgcaaaacctatt
cctgctcagttccagcaggcttggatgcaaaataaagttccaattcctgccccaaatgag
gtactgaatgacagaaaagaggacattaaattggaagagaagaagaaaacacaagcagaa
attgagcaagaaatggccacattacagtatactaacccacagcttctggagcaacttaaa
attgaaagacttgcacagaaacaggctgagcaaattcagcctcctccttcatctggcacc
cctctcctcggaccccagccctttccaggacaaggtccaatgtctcagattcctcaaggt
tttcagcagccccatccatctcagcagatgccaatgaacatggctcaaatggggcctcca
ggtccacagggacagtttagaccccctggaccccagggacaaatgggaccacaaggtcct
ccgctgcatcagggaggtggggggccacaaggattcatgggaccacaagggccccagggc
ccgccccaggggttgccaaggcctcaggacatgcacgggccccaaggaatgcagaggcat
cctggacctcatggccctttgggacctcaaggaccacctggaccacagggtaattctggt
cctcaaggtcatatgggtcctcagggtccacctggcccacaaggtcacataggccctcaa
ggcccacctggtccccagggtcacttgggccctcaggggcctcctggtactcaaggtatg
cagggaccacctggtcccagaggaatgcaaggacctcctcatcctcatgggatacaaggt
gggccagggtctcaagggatccagggtcctgtgtctcagggacctctgatgggattgaat
ccaagaggaatgcagggtcctccaggcccccgagaaaatcagggtcctgctccccaaggg
atgatgatgggccatccgcctcaagagatgcgaggacctcaccctccaagtggactgctg
ggacatggccctcaggagatgcgaggccctcaggagattcgaggcatgcaggggcctcca
gcccaagggtccatgctgggccccccccaggaattgcgagggcctccaggctcacaaggt
cagcaggggccgccccagggctctttggggcctccaccccagggtggcatgcaagggccc
cctggacctcagggacagcagaacccggcaagagggccacatccatctcaagggccaata
ccattccagcagcagaaaacagctctgctaggtgatgggccccgggcccccttcaatcag
gaaggacagaacgcaggccccccacccctgataccaggcctagggcagcagggagcacaa
ggtcgcatcccccctcttaaccctggacaaggacctggccctaacaaaggtgactcacgc
ggccctccaaaccatcacatgggccccatgtcagagaggcggcatgagcagagcagcggc
cctgagcatgggcctgagagggggcctttccggggcagccaggactgcaggggtccccct
gataggcgtggccctcaccccgacttccctgatgacttcagcagaccagatgacttccac
ccggacaagcgctttggccaccgattacgtgaatttgaggggcgaggaggacctttacca
caagaagagaagtggaggcgtgggggccccgggcctccgtttccacctgatcacagggaa
ttcagcgagggggatggccggggagcagcccggggccctccgggggcttgggaaggccgc
agacctggagatgaacgattcccccgggatcctgaggacccgcgttttcgagggcgcaga
gaagaaagctttagaagaggagcacccccaagacatgagggccgtgcccctcccagagga
agggacagttttcctggtcctgaggactttggtccagaggagaattttgatccttctgat
gaagcagcccgaggaagagatctcagaggtcgaggtcggggtaccccacgaggaggaagg
aagggtttactccccactcctgatgagttccctcgctttgaaggaggacggaaaccagac
tcctgggatggaaatagagagccaggtccaggtcatgaacatttccgtgatgctcctcgc
cctgatcatccccctcacgatggtcattccccagctagcagagaacgttcctcttctctc
cagggcatggacatggcatccttgccaccccgaaagcgtccctggcatgatgggccaggg
acctcagagcacagagaaatggaagccccagggggtccttctgaggatcgaggaggtaaa
ggccgagggggcccaggaccttcccagagagtgccaaaatctgggcgttccagctcgttg
gatggagaccaccatgacagctaccatagagatgaaccttttgggggccctccaggcagt
ggtactccttccagagggggccgaagtggcagtaactggggtagagggagtaacatgaac
tctggcccaccaaggcgaggaacttcaaggggtggtggaaggggtcggtag
DBGET
integrated database retrieval system
