Escherichia coli W: WFL_10625
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Entry
WFL_10625 CDS
T02101
Symbol
dacD
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
ell
Escherichia coli W
Pathway
ell00550
Peptidoglycan biosynthesis
ell01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ell00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
WFL_10625 (dacD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ell01002
]
WFL_10625 (dacD)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ell01011
]
WFL_10625 (dacD)
Enzymes [BR:
ell01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
WFL_10625 (dacD)
Peptidases and inhibitors [BR:
ell01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
WFL_10625 (dacD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ell01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
WFL_10625 (dacD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
AFH11783
UniProt:
E0J165
LinkDB
All DBs
Position
complement(2216564..2217730)
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AA seq
388 aa
AA seq
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MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRN
PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD
LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS
AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG
FNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIW
YGDKENIALGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEIELYDRDKQV
AHWPLVTLESVGEGSMFSRLSDYFHHKA
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacgccgtcttattattgctgcttctttgttcgtttttaacttatcgtctggtttt
gcggcggaaaacattcctttttcacctcagcctccagagattcatgccgggtcctgggta
ttgatggattacaccaccggtcagatcctcaccgcgggtaatgagcatcaacagcgcaat
cccgccagcctgacaaagctgatgacgggttatgtcgtggatcgcgctatcgatagtcat
cgcattacgccagacgatattgtcaccgtggggcgcgatgcgtgggcgaaagataatccg
gtgtttgtcggttcttcactgatgtttttgaaagagggcgatcgcgtatcggtacgtgat
ttaagccgtggtttaattgtggattccggaaatgacgcttgtgttgctctggctgactat
attgccggtgggcaacggcagtttgttgaaatgatgaacaactatgccgagaagctgcat
ctcaaggatacgcattttgaaacagtgcatggtctggatgcacctggccagcatagctcg
gcttatgatttagctgtgctttctcgtgctatcatccacggcgagcccgagttttatcat
atgtacagtgagaaaagtctcacctggaacggtatcacccagcaaaaccgtaacgggttg
ttgtgggataaaaccatgaatgttgacggcctgaaaacgggtcatacttctggtgccggt
tttaacctcattgcttcggctgtagatgggcagcgtcgtctcattgcagtggtaatgggg
gctgacagtgcaaaaggtcgtgaggaagaggcaagaaaattactgcgttgggggcaacaa
aactttactacggtgcaaattttgcaccgtgggaaaaaggtcggtacggaacgcatctgg
tatggcgataaagaaaatatcgccctgggaacagaacaagagttctggatggtactaccg
aaagccgaaattccacatatcaaagccaaatatacccttgatggtaaagaactcaccgcg
ccaattagcgcccatcagcgggtaggggaaattgaactttacgaccgtgataaacaggtg
gcgcactggccgctggttaccctggaatctgttggggaaggcagcatgttttctcgcctg
agtgattatttccaccataaggcctga
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