Escherichia coli W: WFL_20045
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Entry
WFL_20045 CDS
T02101
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ell
Escherichia coli W
Pathway
ell00300
Lysine biosynthesis
ell00470
D-Amino acid metabolism
ell01100
Metabolic pathways
ell01110
Biosynthesis of secondary metabolites
ell01120
Microbial metabolism in diverse environments
ell01230
Biosynthesis of amino acids
Module
ell_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ell00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
WFL_20045 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
WFL_20045 (dapF)
Enzymes [BR:
ell01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
WFL_20045 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
AFH13652
UniProt:
E0J3Y6
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Position
4214124..4214948
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE
PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE
SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV
ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctcgaaaatgcatggccttggcaacgattttatggtcgtcgacgcggtaacg
cagaatgtctttttttcaccggagctgattcgtcgcctggcggatcggcacctgggggta
gggtttgaccagctgctggtggttgagccgccgtatgatcctgaactggattttcactat
cgcattttcaatgctgatggcagtgaagtggcgcagtgcggcaacggtgcgcgctgcttt
gcccgttttgtgcgtctgaaaggactgaccaataagcgtgatatccgcgtcagcaccgcc
aacgggcggatggttctgaccgtcaccgatgatgatctggtccgcgtaaatatgggcgaa
cccaacttcgaaccttccgccgtgccgtttcgcgctaacaaagcggaaaagacctatatt
atgcgcgccgccgagcagacaatcttatgcggcgtggtgtcgatgggaaatccgcattgc
gtgattcaggtcgatgatgtcgataccgcggcggtagaaacgcttggtcctgttctggaa
agccacgagcgttttccggagcgcgccaatatcggttttatgcaagtggttaagcgcgag
catattcgtttacgcgtttatgagcgtggggcaggagaaacccaggcctgcggcagcggc
gcgtgtgcggcggttgcagtagggattcagcaaggtttgctggccgaagaagtacgcgtg
gaactccccggcggtcgtcttgatatcgcctggaaaggtccgggtcacccgttatatatg
actggcccggcggtacatgtctacgacggatttattcatctatga
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