Eubacterium callanderi: ELI_0005
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Entry
ELI_0005 CDS
T01336
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
elm
Eubacterium callanderi
Pathway
elm03030
DNA replication
elm03430
Mismatch repair
elm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
elm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ELI_0005
03430 Mismatch repair
ELI_0005
03440 Homologous recombination
ELI_0005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
elm03032
]
ELI_0005
03400 DNA repair and recombination proteins [BR:
elm03400
]
ELI_0005
Enzymes [BR:
elm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ELI_0005
DNA replication proteins [BR:
elm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ELI_0005
DNA repair and recombination proteins [BR:
elm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ELI_0005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Lys_Orn_oxgnase
Motif
Other DBs
NCBI-ProteinID:
ADO35030
UniProt:
E3GHQ1
LinkDB
All DBs
Position
2448..3563
Genome browser
AA seq
371 aa
AA seq
DB search
MKFSCSRDALINALSIAQKGVSNKTTLPVLEGILFQVYNNQLVLTSTDLEIGVQTSIPAN
VDMDGEIILSSNLITEVIRKLSGEEVFFQKDDSNQVKIECLLSNFTIKGFPTDEFPEFPE
VIEEHSFVIEAGVLKEMIRGTIFSVAVSENIPVLTGLKMEIENDAISLIALDGYRLSLKR
GKLKEAIDGSISVIIPGKSMNELNKLLSGYNENVIVKFSKTQIFFEMGNTQFTSRLLEGE
FINYKHIIPTEKATQVKVSRKLLLESSERAALLAREGKNNLIKMDFNIDQLILTSNAEIG
DVFEVIPIENQGDPIKIAFNSKFFIDALKVIDRDEMSIELTTSVGPAVIVPADGSDEFIY
LILPVRIAEEA
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcagctgctcgcgtgacgcgcttatcaacgctttatccattgcccagaaaggg
gtatctaataaaaccacccttcctgttcttgagggaatcttgtttcaggtatacaataat
caattagttttaacctccacggatctggaaatcggcgttcaaaccagtattccggccaat
gtggacatggatggtgagattattttatcatccaatctgattactgaagtgatccggaaa
ttatcgggagaagaggtttttttccaaaaagatgactcgaaccaggtgaaaattgaatgc
ctcctgtcaaactttaccattaagggcttcccgaccgatgagtttccagaatttccggaa
gtcattgaggagcacagctttgtcattgaagcaggtgttctgaaagaaatgatccgcggc
accattttttcggtggctgtcagcgaaaacattccagtgctcacggggcttaaaatggaa
attgaaaatgacgccatcagcttaatcgccctggacggataccgcctttccttaaagaga
ggtaagctcaaggaagccattgacggcagtatttctgtgattatcccgggaaagagcatg
aacgagctcaataagctgttatccggttataatgaaaatgtcattgtgaaattctcaaaa
acccagattttctttgaaatgggcaatacccagttcacctcccgcctgctggagggtgaa
ttcatcaattataagcacattatcccaacagaaaaagccacccaggtcaaggtttccaga
aagctacttttagagagcagtgaacgcgctgcccttttggcgagagagggtaagaataac
ctcattaaaatggactttaacattgaccagctgattttgacctccaatgctgaaatcggg
gatgtctttgaggtgattccaattgaaaatcaaggcgatcccatcaaaatcgcttttaac
tccaagtttttcatcgatgcgctgaaggttatcgaccgggatgagatgagtattgagctg
accacctctgttggaccggcggtgatcgtaccggcagacggttcagatgaatttatttac
ctgattctgccagtccggatcgctgaggaagcctga
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