Eubacterium callanderi: ELI_0171
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Entry
ELI_0171 CDS
T01336
Name
(GenBank) hypothetical protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
elm
Eubacterium callanderi
Brite
KEGG Orthology (KO) [BR:
elm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elm03019
]
ELI_0171
Messenger RNA biogenesis [BR:
elm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ELI_0171
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
CoV_NSP2_C
DUF1758
Motif
Other DBs
NCBI-ProteinID:
ADO35196
UniProt:
E3GHN8
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All DBs
Position
177900..178844
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AA seq
314 aa
AA seq
DB search
MEIKNLQKGQPFLGYLFIKSQVTKTAANGSRYFNMKLTDTNFDEIDGKMWDVKEADEEEF
VTGKLVKIKGAVQEYNGHLQLIANRMRLANEGDDVSIDDFVECAPKNVNEMIGEINTTID
AFANEDIKKLTKAIFEDKTKVLSYFPAAKSNHHALKGGLLYHTYSMLQIGKSLTPLYPFL
NADLLYSGIILHDIGKITEMESDENGSVSDYTEEGKLLGHIVTEIVEIDQYGQKLGVSEE
VLLLLKHMILSHHYEAEYGSPKKPMFPEAELLHHIDIIDARMNTMEKVQNSLEPGAFSEK
IWGLDGIQLYRSKL
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggaaataaaaaatctacagaagggtcagccgtttttaggctacctctttatcaaatct
caggtaaccaaaaccgctgccaacggcagccgctattttaatatgaagctcaccgacacc
aactttgatgaaatcgacggaaaaatgtgggatgtcaaggaagccgatgaagaggaattt
gtcactggcaagctcgtaaagatcaaaggcgctgtccaggaatacaacgggcatctccag
ctcattgccaaccgtatgcgtctggccaatgagggcgacgatgtcagcatcgacgatttt
gtggagtgtgcccccaaaaatgtcaatgagatgatcggagagatcaatacgaccatcgat
gcctttgcgaatgaagacattaagaagctgaccaaggccatttttgaagataagacaaag
gtactgtcctatttcccggccgctaagtctaaccaccatgccctaaagggcggactgctc
tatcatacctattccatgctgcaaatcggaaaaagcctgacaccgctttacccatttctc
aatgcagatttattgtattcgggcatcatccttcacgacatcggcaaaattaccgagatg
gaatccgatgaaaacggctctgtaagcgactataccgaggaaggcaagctgttggggcat
atcgtcacagaaatcgtggaaatcgaccaatatggacaaaaactcggtgtcagcgaggaa
gttcttctcctcttaaagcacatgattctgtcacaccattacgaagccgaatacggaagc
cccaaaaagccgatgtttccagaagctgagctgcttcaccacatcgacatcattgacgcc
cgtatgaataccatggaaaaagttcagaacagcctagagcctggcgccttctccgaaaag
atctgggggctggatggtatccagctttaccggagcaaattgtaa
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