Eubacterium callanderi: ELI_1573
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Entry
ELI_1573 CDS
T01336
Name
(GenBank) DNA polymerase III PolC
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
elm
Eubacterium callanderi
Pathway
elm03030
DNA replication
elm03430
Mismatch repair
elm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
elm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ELI_1573
03430 Mismatch repair
ELI_1573
03440 Homologous recombination
ELI_1573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
elm03032
]
ELI_1573
03400 DNA repair and recombination proteins [BR:
elm03400
]
ELI_1573
Enzymes [BR:
elm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ELI_1573
DNA replication proteins [BR:
elm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ELI_1573
DNA repair and recombination proteins [BR:
elm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ELI_1573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
Rv2179c-like
RNase_H_2
DEDDh_C
DUF655
DNA_pol_A_exo1
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
ADO36559
UniProt:
E3GLI6
LinkDB
All DBs
Position
1482752..1486861
Genome browser
AA seq
1369 aa
AA seq
DB search
MDALNPIIHKQNDLEELIKKYELKPQRVEVNSASQELVFTFKTRIPECDSISVQRELVDI
FDYTKSLSVIISPEAEGNNEAGAKKSVHKLMENVDYDALAKKKEDALNKRLKVIKDTPPA
KAGTGSPGRKDGKEEEARVLGVGEVVMGDKIKRPAQSMGEIDFSTGAVLESTNIVVSGRV
FGIDSREITDKTTLFTFNITDEHGSVSCKIFARKKNVGMIKENLKKDRWFKVEGNINYDE
YSHEKVLTPKNMEVAAAPVRRDNAEEKRVELHLHSQYSSMDAVSKVAKIMKQANDFGHDA
IGITDHGVLQAYPEMMSLSKKYGIKVLYGVEGYLVDDDQYIVTGEQNESFEGEFVFFDLE
TTGLIPGKDNIIEIAAVKIKNKHIVDTFSKIVNPHRPIPPFITNLTGITNQMVEDGEEEE
AAVKAFCEFCGDLILVAHNAKFDMGFMEIALNAHHLENNITYIDTLAMSRTLIPTINKHN
LKKLASYFKVDMGHHHRALDDSVCSAKIFVKLMELAQKRDVEEVAGLNGLMDVEQIIKSG
DTYHIIIYAKNQAGLKDLYKLVSEAHINYFYRRPRIPKSLLAAHRENLIIGSACEAGELY
KAVLKNVPKNRLDEIADFYDYFEVQPLGNNEYLLRNETVHSMEELADVNRRIVELGREKG
KLVVATGDVHFVDPSDAYFREILQAGQGYKDSHEQPPLYYRSTQEMLDEFTYVDPQTAYE
LVVTNPRRVAELFDDVKPIPDGTFPPIIEGSDDEIRDMVYKKAHEMYGDPLPDIVEQRVK
RELDSIIGNGYSVLYLIAQKLVHHSLEDGYLVGSRGSVGSSLVAMLCGITEVNSLAPHYV
CPNCKHYEFFDSTKVGVGPDLPNADCPECGHPMNKDGFDIPFETFLGFEGDKEPDIDLNF
SGENQPEAHHYTEVLFGEGKVYRAGTIATLADKTAFGYVKNFFDENGVTAPRAEMERVIE
GCAGVKRTTGQHPGGVMVVPKDKDIYDFTPIQYPADDRDCGTMTTHFDYHSISGRLLKLD
ILGHDDPTMLRMLKDITGLDPQEIPLDDEKVISLFTGTSALDLKDDDFDIPLGTCGIPEF
GTNFVRQMVLDTKPTAFSDLIRISGLSHGTDVWTNNAQDLVRSGTATIKDVICTRDDIML
GLISMGLAPKESFSIMEHVRKGKGLTEDEEAYMKENNVPAWYIDSCKKIKYMFPKAHAAA
YVMMAFRIAYYKVYYPLAYYATYYSIRAKEFNLEKMTNGKETVKKTLAEIRSQGNKASNK
DQQLLTSLELALEMYCRGFGFKNVDVYESHYSEFKIIGNDLLPPLNAIDGLGDKAAMQIY
EEAQKRPFISKEDLQTRAKVNKSNIEKLEQFGCLSSLPDSNQMSFLTMM
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
gtggacgccttgaatccgattatacataaacagaatgatttagaagaactcataaagaaa
tatgagctaaagccccagcgtgtcgaggtgaattctgcgagccaggagctggtttttact
tttaaaacccgaatcccggagtgtgacagcatttcggtccagcgggagctcgtggatatt
tttgattacactaagagcctgagtgtcattatttcgccagaggctgaggggaataatgag
gctggggctaagaaatcagtccacaagctcatggaaaacgtggattacgacgctctggct
aaaaagaaagaggacgcgctgaacaagcggttaaaggtcataaaggatacgccgccggct
aaggctggcaccggctcgccggggagaaaggatggcaaagaggaggaagcccgtgtgctg
ggcgttggcgaagttgtcatgggggacaagatcaagcgtccagcccagtccatgggagaa
attgacttcagtaccggcgcggtgcttgaaagcaccaacattgtggtcagcggccgtgtc
tttggcattgactcaagagaaattacggataaaacaactctctttacctttaacattacc
gatgaacatggcagtgtctcctgtaagattttcgcccggaagaagaatgtgggcatgatc
aaggaaaatctgaaaaaggaccgctggtttaaggttgaggggaatatcaattatgacgag
tactcccacgaaaaggtgctgacgcccaaaaatatggaggtagccgcagcgccggtgcgc
cgtgacaacgcagaagaaaagcgcgtcgagcttcaccttcacagccagtacagctccatg
gatgcagtgagcaaggtagctaaaatcatgaagcaggccaatgactttggccacgacgcc
atcggcatcaccgaccacggagtgctccaggcttaccctgaaatgatgtccctgagcaaa
aaatatggtatcaaggtgctgtatggcgtggagggctacctggtggacgatgaccagtac
attgtaacaggggaacagaatgaaagctttgagggtgaatttgtattctttgaccttgag
accactggcctgattcccggtaaggacaatattattgagattgctgctgtcaaaattaaa
aacaagcatattgtggacaccttctccaaaatcgtcaatccacaccggcctattccaccg
tttatcaccaatctcaccgggattaccaatcagatggttgaggacggcgaagaggaagaa
gctgcggttaaagccttctgcgaattttgcggcgatctgatcctggtggcacacaacgca
aaatttgatatgggttttatggagattgcgctgaatgcgcaccacctggaaaacaacatc
acctatattgacacgctggcaatgtccagaacactgattccaaccatcaacaaacataat
ctcaaaaagctggcgagctattttaaagtggacatggggcaccatcaccgggcgctggac
gactcagtatgctcggcgaaaatttttgtcaagctgatggagctggctcagaaacgggat
gtggaagaggtcgctgggcttaatggcctgatggatgtggaacagatcataaaatctggc
gatacctatcatattatcatctacgccaaaaaccaggcggggctgaaggatctgtacaag
ctggtttctgaggcacatatcaattatttctacagacgcccgaggataccaaaatccctg
ttggcggctcaccgggaaaatctgattattggcagcgcctgcgaggctggagagctgtac
aaggcagtgctgaaaaatgtgcccaaaaaccgactggatgaaatcgctgatttttatgac
tactttgaggtacagcctctgggaaacaatgaatacctgcttcggaatgagaccgtccac
tccatggaagagctggcagatgttaaccggcggattgtcgagcttgggcgggaaaagggc
aagcttgtggttgccaccggggacgtccattttgtggaccccagtgacgcctatttcaga
gagattctgcaggctggccagggctacaaggattctcatgagcagccgccgctttactac
cgctcgacccaggaaatgctggacgaatttacctatgtggacccgcagaccgcttatgag
ctggtcgttaccaacccgcgcagggtggcggaactgtttgacgatgtgaagcccataccc
gatggcacctttcctcccatcattgagggatcggatgacgagattcgggatatggtttat
aaaaaggcccatgagatgtacggtgacccgctgccggacattgttgagcagcgcgtgaag
cgagagctggactccattatcggcaacggctattcggttctgtacctgatcgcccagaag
ctggtacaccattccctggaggatggttacctggtaggctccagaggatcagtcggttcg
tcactggttgccatgctctgcgggatcacagaggttaactctctggcgccccactatgtc
tgcccgaactgcaagcattatgagttctttgacagcacaaaggtgggggtggggcctgac
cttcccaacgctgactgtccggaatgcggccatcccatgaataaggacggttttgatatt
ccatttgagaccttccttggctttgagggggataaggagccggatattgaccttaacttt
tcgggcgaaaaccagccggaggcccaccattacaccgaggtgctctttggcgagggcaag
gtctaccgcgcgggaaccattgcgacgctggcagataagacagcctttggctatgtgaaa
aatttctttgatgaaaatggcgttaccgcgcccagagcagagatggaacgtgtgattgag
ggctgtgcgggcgttaagcgtaccacaggccagcaccccggcggggtaatggttgtgcca
aaggataaggatatctatgattttacgccgatccagtacccggccgatgaccgggactgc
ggcaccatgaccacccatttcgattaccattccatttccgggcgtctcctgaagctcgat
attctgggtcatgatgacccgaccatgctccgtatgctcaaggacattacaggacttgac
ccccaggagattccgctggacgacgaaaaggtcatcagcctgttcacaggcaccagtgcc
ctggacctgaaggatgatgattttgacatccccctcggtacctgcggtatccctgagttt
gggaccaactttgtccgtcagatggtgctggacaccaagcccacagccttttcagacctg
atccgtatttccggcttatcccacggcacagacgtctggaccaacaatgcgcaggacctt
gtgcgttctggaactgcgaccatcaaggacgttatctgtacccgtgacgatattatgctc
ggactgatctcaatgggactggcgcctaaggaatccttcagcattatggagcatgtccgt
aaagggaagggcctgacagaggatgaggaagcgtatatgaaggaaaataatgtaccggcc
tggtacattgattcctgtaaaaaaatcaagtacatgttccctaaggcccatgcggcagcc
tatgttatgatggccttccgcatcgcctactacaaggtttattacccgttggcttactac
gccacctattacagtatccgcgccaaggaatttaatttggaaaagatgaccaacggcaag
gagactgtcaagaaaacactggcggaaatccgctctcaggggaacaaggccagcaacaag
gatcagcagcttctgacttcgctggagctggcgctggaaatgtactgccgtggctttggc
tttaaaaatgtggatgtctacgagtcccactacagcgagtttaaaattattggcaatgat
ttgctgccaccgctcaacgccattgacggcctgggtgataaggcggccatgcagatttat
gaggaagcccagaagcggcccttcatctccaaggaggatctgcagaccagagccaaggtc
aataaatccaatatcgaaaagcttgagcagtttggctgtctgagcagcctgccagactcc
aatcagatgagctttttaaccatgatgtaa
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