Eubacterium callanderi: ELI_2063
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Entry
ELI_2063 CDS
T01336
Name
(GenBank) hypothetical protein
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
elm
Eubacterium callanderi
Pathway
elm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
elm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ELI_2063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elm03019
]
ELI_2063
03016 Transfer RNA biogenesis [BR:
elm03016
]
ELI_2063
Enzymes [BR:
elm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ELI_2063
Messenger RNA biogenesis [BR:
elm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ELI_2063
Transfer RNA biogenesis [BR:
elm03016
]
Prokaryotic type
tRNA degradation factors
ELI_2063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
GcvP2_C
PCB_OB
OB_RRP5_4th
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
ADO37046
UniProt:
A0A853JJ90
E3GMI3
LinkDB
All DBs
Position
1922753..1924831
Genome browser
AA seq
692 aa
AA seq
DB search
MRIFETEIAGRPFRVEIGEVAQLAKGSAMIRYGETSVLAIAAASKKPREGMDFFPLSVDY
EEKQYAVGKIPGGFLKREGRPSEKAILNSRLIDRPIRPLFPKGFRNDVQVVTTVMSVEQD
NAPEIAAMIGASIALSISDIPFDGPTGSVAVGLIDGEFILNPTEAQREVSDLSLTVAGTK
DAIMMVEAGANEVSEETMLEAILFAHEEIKKIVAFQEEIVAAVGVEKKDYTLYLPTDELT
AEVEAFVGGKMHEAVHTEDKTERLENIDAVKTEVVEHFGELYPEQLNDIDTILTALQKKE
VRSLILVDRIRPDNRKMDEVRPITAKIDYIPRVHGSGLFTRGETQVLSIATLGVLRDAQV
LDGLSNDTEKRYMHQYNFPGYSVGEARPMRSPGRREIGHGALAERALLPMIPPEEEFPYA
IRVVSEVLSSNGSTSQASVCGSSLALMAAGVPLKKPVAGVAMGLIKEDEKLAILTDIQGM
EDFLGDMDFKVAGTKDGITAIQMDIKIHGIDREILTQALEQARIGRMHILGIMNEEISEP
RAELSPYAPRIMTMTINPDKIRDVIGSGGKVINKIIEETGVKIDIEDDGTIYIASEDGVA
ADKAKAIIEDIVKEVEVGEVYTGEVVRIMNFGAFVSLPGGKDGLIHISKLAKERVKSVED
VVKLGDVVTVKVVEIDDKGRINLSRKACLPKD
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgagaatatttgaaacagaaattgccggccgcccttttagagtggaaatcggcgaggtt
gcacagcttgctaagggctctgcaatgatccgctatggtgaaaccagtgttctggccata
gccgctgcatctaaaaaaccccgtgaaggcatggatttttttccgctgagcgtggattat
gaagaaaaacaatacgcggttggtaagataccaggaggcttcctgaaaagagaaggccgt
ccttctgaaaaagcaattttaaactcacgtttaattgaccgcccgattcgtccgctgttc
ccaaagggcttccgcaacgatgtccaggtggttactacagttatgtctgttgaacaggat
aacgcgccggaaatcgccgcgatgatcggcgcatccattgccctcagcatttcagacatt
ccttttgacggccctaccggttcagtagctgtcgggttgatcgacggcgagttcattctg
aacccgaccgaagcccagcgtgaagtcagcgatttaagcctgaccgtcgccggtaccaag
gacgccatcatgatggtagaagccggcgccaacgaagtttctgaagaaaccatgctggaa
gcgattttattcgcgcatgaagaaatcaagaaaatcgtcgcttttcaggaagagatcgtc
gcagccgtcggcgtggaaaaaaaggattatacgctttatctgccaacggacgagctgact
gcagaggtagaagcttttgtgggcggtaaaatgcatgaagcggttcacactgaagataaa
acagaacggcttgaaaatattgacgcggttaagactgaagttgttgaacattttggcgag
ctttatcctgaacagttaaatgatattgacactattttaaccgctcttcagaaaaaagaa
gtccgcagtctgattctggtagaccgtatccgtcccgataaccgtaagatggatgaagtt
cgtccgatcactgcgaaaatcgattatatcccgagagtgcatggttccggcctcttcacc
agaggggaaacccaggtgctttccatcgcgactttaggtgtcctgagagatgctcaggta
ctggatggcttatccaacgatacggaaaaacgctatatgcaccagtataacttccctggc
tacagcgttggtgaagcacgaccaatgagaagcccgggccgccgcgaaatcggccacggc
gcactggcagagcgcgcgctgctgccaatgattccgccggaagaagaattcccctatgct
atccgtgtcgtgtctgaggttttaagctcaaacggttcgacctctcaggccagcgtatgc
ggcagcagccttgccctgatggcagcgggtgtaccgcttaagaagccggttgccggtgtg
gcaatggggctgatcaaggaagatgaaaagctggccattttaaccgatatccagggcatg
gaagacttccttggggacatggactttaaggttgccggtactaaagacgggatcaccgcg
attcagatggatatcaagatccacggtatcgacagagagattttaacccaggcactggaa
caggcccgcattggccgtatgcatattctggggatcatgaatgaagaaatttctgaacca
cgcgctgagttatcaccatacgcaccgcgtattatgaccatgaccatcaaccctgacaag
attcgtgacgttatcggctcaggcggaaaggtcatcaataagattattgaggaaaccggc
gttaagattgatattgaggacgatggtaccatctatatcgcttctgaagacggcgttgcc
gcagataaagcaaaggcgattattgaagatattgtcaaagaagtggaagtcggagaggtt
tatacaggtgaagtcgttcgtattatgaacttcggtgcctttgtatctttacctggcggt
aaagacggcctgatccatatttccaagcttgccaaggaacgcgtgaaatccgtagaggat
gttgtaaagcttggtgacgtcgtaaccgtcaaagttgttgaaattgacgataagggccgt
atcaatttatcaagaaaagcgtgcttacctaaggattga
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