Eubacterium callanderi: ELI_2988
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Entry
ELI_2988 CDS
T01336
Name
(GenBank) Formamidopyrimidine-DNA glycosylase-like protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
elm
Eubacterium callanderi
Pathway
elm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
elm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ELI_2988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elm03400
]
ELI_2988
Enzymes [BR:
elm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ELI_2988
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ELI_2988
DNA repair and recombination proteins [BR:
elm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ELI_2988
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
DNA_ligase_ZBD
NFACT_N
Zn_ribbon_TFIIB
CoV_NSP13_ZBD
Auto_anti-p27
Ribosomal_S13
Zn_ribbon_LysW
Motif
Other DBs
NCBI-ProteinID:
ADO37957
UniProt:
E3GEH1
LinkDB
All DBs
Position
complement(2759670..2760503)
Genome browser
AA seq
277 aa
AA seq
DB search
MLELPESYTIAGQLDEIVKGKQIEQVVAGASPHKFAFFNGEPEACRGQLLGMKVDRATSY
GGYVEIEFGDKRLLLGDGVNIRYLEAKEKKPKKHQLLLTFEDESALVFSVAMYGAIWAYT
EGENDNYYHQVAREKPSPLSGEFNWEWFEGIVAAAKKNTSAKALLATEQRIPGLGNGCLQ
DILFNARVNPRTKLEYLTEEELSRLFDSVKATLHQMTVKGGRDTEKDIFGMKGGYKSILS
KNTYKAPCPVCGGAIVKEAYLGGSVYYCPNCQPNKNC
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgctggaattaccagaaagctataccatagctggacaattagacgagatcgttaaagga
aaacagattgagcaggtggttgcgggagcatcaccacataaattcgccttttttaatggc
gagccggaagcctgccgtgggcagcttctggggatgaaagtagacagggccacgtcgtac
ggcggctatgttgaaattgaatttggggataagcggcttttgctgggggacggtgtcaat
atacgctatctggaggcaaaggaaaaaaagcccaaaaagcatcagctgctgctgaccttt
gaggatgagagcgctctggtcttttcggtggcgatgtacggggcaatctgggcatataca
gaaggagaaaatgacaattattaccatcaggttgccagagaaaagccatcgcccttaagc
ggagaatttaactgggaatggtttgaaggcattgtggctgcggctaagaagaataccagc
gcaaaggctcttctggcaacggaacagcggattcccggtctgggcaatggctgcctgcag
gatattctttttaacgctcgagtgaaccccagaacaaagctggaatatctgacggaagag
gaactcagccgtctgtttgactctgttaaagccactctgcatcagatgactgtaaaagga
gggcgggataccgagaaggatatttttggcatgaagggcggctataaaagcattttatcc
aaaaatacttataaagcgccctgtccggtctgcggcggtgccattgtcaaggaagcctat
ctgggcggcagcgtttattactgtccaaactgccagcccaataaaaactgttaa
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