Escherichia coli O83 H1 NRG 857C (AIEC): NRG857_03560
Help
Entry
NRG857_03560 CDS
T02068
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
eln
Escherichia coli O83:H1 NRG 857C (AIEC)
Pathway
eln03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NRG857_03560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eln03019
]
NRG857_03560
Enzymes [BR:
eln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NRG857_03560
Messenger RNA biogenesis [BR:
eln03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NRG857_03560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
ADR26142
UniProt:
A0A0H3EGI1
LinkDB
All DBs
Position
780206..781567
Genome browser
AA seq
453 aa
AA seq
DB search
MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL
QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK
RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI
GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGRGQGGGRGQQQPRRAESGAKSGN
AKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgattctttgggtttaagccctgatatcctgcgcgccgttgccgagcagggt
taccgtgaacccacccctattcagcagcaggcgatccctgcggtgctggaaggccgcgac
ctgatggccagcgcccagaccggtaccggcaaaacagcgggctttacgctgccgctgttg
caacacctgatcactcgccagccgcacgccaaagggcgtcgtccggtacgcgcgctcatt
cttaccccgacccgtgaactggcggcgcagattggcgaaaacgtccgtgattacagcaaa
tatctgaacattcgttcgctggtggtgtttggcggtgtcagcattaacccacaaatgatg
aagttgcgcggcggcgttgatgtgctggtggcaacgccgggacgtctgctggacctggaa
catcaaaatgcagtgaagctggatcaggttgaaatcctcgtccttgatgaagctgaccgc
atgctcgacatgggctttatccacgatatccgtcgcgtgttaacaaaactgccagcgaag
cgccagaacctgttgttctccgcgaccttctctgacgatattaaagccctggcggaaaaa
ctgttgcacaacccgctggaaatcgaagtggcacgccgcaatactgcgtctgatcaggtg
acccagcacgttcactttgtcgataagaaacgcaaacgcgaattgctgtcgcatatgatt
gggaaagggaactggcagcaggtgctggtgtttacccgtaccaaacatggcgctaaccat
ctggctgaacagcttaataaagacggcatccgtagtgcggcgatccacggtaataaatcg
caaggtgcgcgtactcgtgcgctggccgattttaaatcgggcgatattcgtgtactggtg
gcaactgacatcgctgcgcgcggtctggatatcgaagagttgccgcacgtcgtcaactat
gagttaccaaacgtaccggaagattatgttcaccgtatcgggcgtactggccgtgcggcg
gcaactggcgaagcattgtcgctggtgtgtgttgatgaacacaaactgctgcgtgatatc
gaaaaactgctgaaaaaagagatcccgcgcattgcgattccggggtatgagccggacccg
tcaatcaaagccgaaccgatccagaacggtcgccagcaacgtggcggcggtcgtggacag
ggcggtggtcgcggtcaacagcaaccacgccgtgcggaaagtggtgcgaagtctggtaac
gcgaagcccgcagaaaaaccgtctcgtcgtctcggcgatgccaaaccggcaggcgaacaa
caacgtcgccgccgtccgcgtaaacctgccgctgcgcagtaa
DBGET
integrated database retrieval system
