Escherichia coli O83 H1 NRG 857C (AIEC): NRG857_06610
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Entry
NRG857_06610 CDS
T02068
Name
(GenBank) RNase II stability modulator
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
eln
Escherichia coli O83:H1 NRG 857C (AIEC)
Pathway
eln02024
Quorum sensing
eln02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
eln00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NRG857_06610
02026 Biofilm formation - Escherichia coli
NRG857_06610
Enzymes [BR:
eln01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
NRG857_06610
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
ADR26750
UniProt:
A0A0H3EGI0
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All DBs
Position
complement(1368376..1370361)
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AA seq
661 aa
AA seq
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MKTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTEITEPDRILQLSAEQAARIREMTVI
TSSLMMSLTVDESDLSVHLVGRKINKREWGGNASAWHDTPAVARDLSHGLSFAEQVVSEA
HSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSG
NAYEVELWIPTRKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTD
SITGLPNRNAMQELIDHAINQADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAI
LSCLEHDQVLARPGGDEFLVLASNTSQSALEALASRILTRLRLPFRIGLIEVYTSCSVGI
SLSPEHGSDSAAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND
QLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVV
RQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEND
ELALSVIQQFSRLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLV
RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR
A
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccgttagggagtccacaacgttgtacaactttctcggatcgcacaatccatac
tggcggttgacggaaagcagcgatgttttgcgcttttctaccaccgaaatcacagaaccc
gatcgtattttgcaactatctgccgaacaggctgctcgcatcagggaaatgacggtcatc
acctccagcctgatgatgagtctgaccgtcgatgaaagcgatctttctgtgcatctggta
ggacgaaaaatcaataaacgagaatggggaggcaacgcgtctgcatggcatgacacaccg
gcggttgctcgtgatttatcacatgggctttcctttgctgagcaggtagtttctgaagca
cattccgcaatagtgattctcgacagccgggggaatatccagcgcttcaatcggttatgt
gaagattacacggggttgaaagaacacgacgtcattgggcaaagcgtgtttaaactgttt
atgagtcgtcgtgaagctgcggcatccaggcgcaataaccgtgtattttttcgaagcggc
aatgcatatgaagtcgaactatggataccaacacgtaaaggccagcggctgtttctgttt
cgcaataaatttgtccacagcggcagtggcaaaaacgagatttttttaatctgttccggc
accgacattaccgaagagcgccgcgctcaggagcgactgcgtattctggcaaataccgac
agtatcaccggactgccgaatcgtaacgcgatgcaggagttaatcgatcacgctattaat
caggcagataacaataaagttggggttgtgtatcttgatttggataattttaaaaaggtc
aacgacgcctatgggcatttgtttggtgaccagttattacgcgacgtgtcattggctatt
ttaagctgtctcgaacatgaccaggtattggcgcgtccaggtggcgatgagtttctggta
ctggcatccaatacctcacaaagcgcgctggaagcattggcatcacgaattttgacccgc
ttacgactcccctttcgcattggtttaattgaagtttataccagctgttcagtaggtatt
tcactctctcccgaacatggttcggacagcgcggctattattcgtcacgccgacacagca
atgtacacagcgaaggaaggcggacgaggacaattttgcgtttttaccccagaaatgaat
cagcgggtatttgaatatctctggctggataccaacttgcgtaaagcactggaaaacgat
cagttggttattcactatcaaccgaaaatcacctggcgtggcgaagtgcgcagtctggaa
gcactagtacgttggcagtcacctgaacgtgggttgattccaccgttggacttcatttcc
tacgccgaagaatcagggctaattgtgcctttaggccgttgggtgattctcgatgtcgta
cgccaggtagcgaagtggcgggataaaggcattaacctgcgagtggcggtaaatatttct
gcacgtcagctcgccgatcaaaccattttcaccgccctgaaacaggttctccaggaactc
aattttgaatactgccctatagatgttgaactgacggagagctgcctgattgagaatgat
gaactggcactgtctgttattcaacaatttagccgattaggtgcgcaagttcatctggac
gattttggtaccggctactcttcactttcgcaactggcgcgctttccgatcgatgccatc
aaacttgaccaggtttttgttcgggatattcacaaacagcctgtctcgcaatcactggtc
cgggcgatcgtcgctgtggcccaggcattgaatcttcaggtgatcgccgaaggtgtagaa
agtgcaaaggaagatgcttttttaaccaagaacgggatcaatgagcgacaaggatttttg
tttgccaaaccgatgcccgccgttgccttcgaacgctggtataaacgctatctgaagcgc
gcataa
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